DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84B and tubg1

DIOPT Version :9

Sequence 1:NP_476772.1 Gene:alphaTub84B / 40848 FlyBaseID:FBgn0003884 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_957202.1 Gene:tubg1 / 393882 ZFINID:ZDB-GENE-040426-836 Length:451 Species:Danio rerio


Alignment Length:447 Identity:137/447 - (30%)
Similarity:240/447 - (53%) Gaps:30/447 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAV 66
            ||.|::.:||.|.|||...|:..|.||||.|:|.:....|  .|.|..:.||.:.....::||||
Zfish     3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHYIPRAV 65

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129
            .:||||.|:..:....|..|::||.:...:.  .|.||:|.| ::.|::|.:.:.|.|.:.||..
Zfish    66 LLDLEPRVIHTILNSPYANLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGS 129

  Fly   130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPYNSILTTHT 193
            ..|:||::.||..||||||..|.|:|||:..|.||....::::| ..::|..||:||||:||...
Zfish   130 DSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKR 194

  Fly   194 TLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 258
            ..:::||..::||.|:..|....|.|:.|:::.:|:|:..|:|:.|.:||:.|.:|.||.....:
Zfish   195 LTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIAS 259

  Fly   259 LVPYPRIHFPLVTYAPVISAEK-AYHEQLSVAEITNACFEPANQMVK---------CDPRHGKYM 313
            |:|.||:||.:..|.|:.:.:. |...:.:|.::.....:|.|.||.         |      |:
Zfish   260 LIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHC------YI 318

  Fly   314 ACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 378
            |...:.:|:|.|..|:.::..|:.::...|:.|.|...:|.::.:.|.:.....::.:     |:
Zfish   319 AILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRRSPYLPSAHRVSGL-----MM 378

  Fly   379 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE---AREDLAALEKDY 432
            :|.|:|:..:.|...::|.:..:.||:..:..|.:.:..|.|   :||.:..|..:|
Zfish   379 ANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDIFKDNFDELDNSREVVQQLVDEY 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84BNP_476772.1 PTZ00335 1..439 CDD:185562 137/447 (31%)
tubg1NP_957202.1 gamma_tubulin 3..435 CDD:276957 136/445 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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