DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84B and tbg-1

DIOPT Version :9

Sequence 1:NP_476772.1 Gene:alphaTub84B / 40848 FlyBaseID:FBgn0003884 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_499131.1 Gene:tbg-1 / 176361 WormBaseID:WBGene00006540 Length:444 Species:Caenorhabditis elegans


Alignment Length:458 Identity:128/458 - (27%)
Similarity:227/458 - (49%) Gaps:46/458 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVD 69
            :::||||.|.|:..|.|:....||||...||...:..:   :|..:..|.:.....:|||||.||
 Worm     8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLVD 69

  Fly    70 LEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 131
            |||.|:: .:::..:..||:.:.:.....  .|.||:|.| |..|:|:.:.::|.|.:.|:....
 Worm    70 LEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNN 133

  Fly   132 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVST-AVVEPYNSILTTHTTL 195
            |.|.|..||..||||||..|||:|||...:.||....::::.....|| .||.|||.:|:....:
 Worm   134 LDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLI 198

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            |:.|...::||.|::.:.......:.||:.::|.|:.:|:|:.||..||:.|:...:.  ..:|.
 Worm   199 ENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIR--YLDLA 261

  Fly   261 PYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPR---HGKYMACCMLYRGD 322
            |:|.:||.....:||:...:.:..:.|||::|....:|.:.||....|   :...::..|..:|.
 Worm   262 PFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASRVRPNDCMLSAYMFLQGQ 326

  Fly   323 VVPKDVNAAIATIKTKRTIQFVDWCPTGF---KVGINYQP--PTVVPGGDLAKVQRAVCMLSNTT 382
            :....:..|      ::.:.|....|..:   .:.:.:.|  |.|.|     :.:.:..:|:|:|
 Worm   327 IEAHTIMTA------EQNVDFAIRRPPFYMLKPLRMMHAPLSPYVRP-----QYKVSGLLLNNST 380

  Fly   383 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS--------EAREDL-----AALEKDYEE 434
            ::|..:..|..|:|.:.:||||:..:  |.::  .||        ...:||     |.::|||..
 Worm   381 SVAPLFESLLSKYDKLRSKRAFIDKF--EKID--NFSLDMMDDAMHIVQDLLDEYKAVVQKDYLT 441

  Fly   435 VGM 437
            .|:
 Worm   442 RGL 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84BNP_476772.1 PTZ00335 1..439 CDD:185562 128/458 (28%)
tbg-1NP_499131.1 gamma_tubulin 5..431 CDD:276957 123/443 (28%)
PLN00222 7..443 CDD:215108 127/455 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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