DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84B and ben-1

DIOPT Version :10

Sequence 1:NP_476772.1 Gene:alphaTub84B / 40848 FlyBaseID:FBgn0003884 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_497728.2 Gene:ben-1 / 175461 WormBaseID:WBGene00000248 Length:444 Species:Caenorhabditis elegans


Alignment Length:458 Identity:188/458 - (41%)
Similarity:274/458 - (59%) Gaps:27/458 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDD----SFNTFFSETGAGKH 61
            |||.:.:..||.|.|||...||:...||||||||      |..|..|    ..|.:::|...||:
 Worm     1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDG------TYKGESDLQLERINVYYNEANGGKY 59

  Fly    62 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 126
            |||||.|||||..:|.||:|.:.|||.|:..:.|:..|.||:|:||||.|.|:||.|||.:||.|
 Worm    60 VPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEA 124

  Fly   127 DQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191
            :.|..||||.:.||.|||||||..:||:.::..:|..:....|::.|:|:||..||||||:.|:.
 Worm   125 EGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSV 189

  Fly   192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
            |..:|::|..|.:||||:||||.|.|.:..|||.:||.|:...:|.:|..|||.|.||.||.:..
 Worm   190 HQLVENTDETFCIDNEALYDICFRTLKLSNPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLA 254

  Fly   257 TNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRG 321
            .|:||:||:||.:..:||:.:.....:..|:|||:|...|:..|.|..||||||:|:....::||
 Worm   255 VNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRG 319

  Fly   322 DVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 386
            .:..::|:..:..::.|.:..||:|.|...|..:...||        ..::.:...:.|:|||.|
 Worm   320 RMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQE 376

  Fly   387 AWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY--------EEVG-MDSGDG 442
            .:.|:..:|..|:.::||:|||.||||:|.||:||..::..|..:|        ||.| :|..||
 Worm   377 LFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAEEDGELDGTDG 441

  Fly   443 EGE 445
            :.|
 Worm   442 DAE 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84BNP_476772.1 PTZ00335 1..439 CDD:185562 184/450 (41%)
ben-1NP_497728.2 PLN00220 1..444 CDD:215107 187/456 (41%)

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