DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub84B and betaTub65B

DIOPT Version :10

Sequence 1:NP_476772.1 Gene:alphaTub84B / 40848 FlyBaseID:FBgn0003884 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_729172.1 Gene:betaTub65B / 117406 FlyBaseID:FBgn0052396 Length:462 Species:Drosophila melanogaster


Alignment Length:455 Identity:159/455 - (34%)
Similarity:245/455 - (53%) Gaps:27/455 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVG--GGD-----DSFNTFFSETGA 58
            |||.:::.:|.||..||::.|.:...|||:        |...|  ||.     :..|.||:.|.:
  Fly     1 MREIVTLQIGGAGNAIGDSFWHVISHEHGV--------DYASGRFGGTSPLQLERINVFFNATAS 57

  Fly    59 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 123
            .:...|.:.:|.|.:.:..:...:  ||:.||..:.|.|.|.||:|||::|.|..|:|.||:..|
  Fly    58 KRFYARTILIDTEASTIQRLNASS--QLYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTR 120

  Fly   124 KLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSI 188
            :..:....||||.:.||.|||||||.|||:||.|...|.......:...|:|.:|..||||||::
  Fly   121 REVESVDSLQGFQLLHSIGGGTGSGLTSLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNAL 185

  Fly   189 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLT 253
            |:|...:.:|...|.:||||::.||.|||.::...|.::|.::...:|.||..|||.|.||..|.
  Fly   186 LSTPALVNNSHLTFCLDNEALFQICNRNLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLR 250

  Fly   254 EFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 318
            :...|:||:||:||.:..:||:::.::....:.:|:|:....|...|.:...|.|.||.:....:
  Fly   251 KIYVNMVPFPRLHFLIPGFAPLVTCKQQQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGI 315

  Fly   319 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTA 383
            :||.:.|::|:..:..::.|....||||.|...|..|...||        ..::.:...:.||||
  Fly   316 FRGRMSPREVDQLMTGVRNKNINNFVDWIPNNIKTAICDIPP--------RGLKMSATFIGNTTA 372

  Fly   384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE--VGMDSGDGEGEG 446
            |...:.||......|..::|.:|||.||||||.||.:|:::|.|:..||..  .|.|||.|.|.|
  Fly   373 IQTLFQRLLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDYRSSAEGEDSGGGGGGG 437

  Fly   447  446
              Fly   438  437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84BNP_476772.1 PTZ00335 1..439 CDD:185562 153/446 (34%)
betaTub65BNP_729172.1 beta_tubulin 2..425 CDD:276956 151/440 (34%)

Return to query results.
Submit another query.