DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub84B and Tubg1

DIOPT Version :10

Sequence 1:NP_476772.1 Gene:alphaTub84B / 40848 FlyBaseID:FBgn0003884 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_598785.1 Gene:Tubg1 / 103733 MGIID:101834 Length:451 Species:Mus musculus


Alignment Length:447 Identity:138/447 - (30%)
Similarity:242/447 - (54%) Gaps:30/447 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAV 66
            ||.|::.:||.|.|||...|:..|.||||.|:|.:....|  .|.|..:.||.:.....::||||
Mouse     3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHYIPRAV 65

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQC 129
            .:||||.|:..:...:|.:|::||.:...:.  .|.||:|.| ::.|::|.:.:.|.|.:.||..
Mouse    66 LLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGS 129

  Fly   130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPYNSILTTHT 193
            ..|:||::.||..||||||..|.|:|||:..|.||....::::| ..::|..||:||||:||...
Mouse   130 DSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKR 194

  Fly   194 TLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 258
            ..:::||..::||.|:..|....|.|:.|:::.:|:|:..|:|:.|.:||:.|.:|.||.....:
Mouse   195 LTQNADCVVVLDNTALNLIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIAS 259

  Fly   259 LVPYPRIHFPLVTYAPVISAEK-AYHEQLSVAEITNACFEPANQMVK---------CDPRHGKYM 313
            |:|.||:||.:..|.|:.:.:. |...:.:|.::.....:|.|.||.         |      |:
Mouse   260 LIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHC------YI 318

  Fly   314 ACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 378
            |...:.:|:|.|..|:.::..|:.::...|:.|.|...:|.::.:.|.:.....::.:     |:
Mouse   319 AILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGL-----MM 378

  Fly   379 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE---AREDLAALEKDY 432
            :|.|:|:..:.|...:||.:..:.||:..:..|.:.:..|.|   :||.:..|..:|
Mouse   379 ANHTSISSLFERTCRQFDKLRKREAFMEQFRKEDIFKDNFDEMDTSREIVQQLIDEY 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub84BNP_476772.1 PTZ00335 1..439 CDD:185562 138/447 (31%)
Tubg1NP_598785.1 gamma_tubulin 3..435 CDD:276957 137/445 (31%)

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