DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tailor and pup-2

DIOPT Version :9

Sequence 1:NP_001262327.1 Gene:Tailor / 40847 FlyBaseID:FBgn0037470 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_498100.1 Gene:pup-2 / 175708 WormBaseID:WBGene00019628 Length:508 Species:Caenorhabditis elegans


Alignment Length:446 Identity:96/446 - (21%)
Similarity:166/446 - (37%) Gaps:117/446 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 IAKAVAHLSEQH----PKPNPNNQPVQPHPTHQTKQEKKQAQVKARQHITVRLPKKARAMIVGEI 220
            :.|..|||....    |..:.||.....|               |.:|||              :
 Worm    71 VTKRPAHLRPPAAFCLPFVSMNNDLTSGH---------------ALKHIT--------------L 106

  Fly   221 TNVFKDKYPIADKLKVIPEYDVIEQDLCKLLSPGFPKQPLRVYK------------------FGS 267
            |:||...:|.     |...| :...|:|..::..:.:..|...:                  ||.
 Worm   107 TSVFDALHPY-----VAMPY-INRMDICSAMNVYWIRNCLEAEQSDLFHRFALEMQVHLSACFGC 165

  Fly   268 RI---------TGIGNRSSDLDLFVDIGKSGNTFHTFEHRASNATVAKLRAMRKFFCD---SEDW 320
            |:         .|.|.|..|:|:.:....|..::.|...|.       :||:.|...|   :.|.
 Worm   166 RVVLDIYGSTRNGFGTRFCDVDMSLSFSPSPPSWATNSDRV-------MRAVAKALVDFPKAVDE 223

  Fly   321 RLINFIEQARVPIIKTCHLPTGIECDICL-NSMGFCNTNLLKYIFESQP-LTQYMCIYVKNWLER 383
            |.:|    |:|||::.......:|.||.. |.:...||.||:...:..| ....:.::||.|.:|
 Worm   224 RYVN----AKVPIVRFRSSDMDMEADISYKNDLALHNTQLLQQYCKWDPERLPTLGVWVKAWAKR 284

  Fly   384 CKLTE----QISTYSITLMVIYFLQLQALLPPIAMLQ-IEDAANQAVLVGPWVVNFAQKSFSELG 443
            ..:.:    .:|:|:..:|:|::||....:|.:..|| :....::.|.|..: ..:..|......
 Worm   285 SGVGDASKGSLSSYAWIVMLIHYLQQVEPIPVLPCLQEMNHQKSENVYVQGY-NTYYWKFVDTAR 348

  Fly   444 LQQLKAT-VPVIKGFLRNFFAYFAKFDYEHFLVCPYIGQANVEIAKIERMLHARYSAYVSDNPEC 507
            .::.:|: |.:..|||..:..|   |||          ..|| |..:.:.|..:...:      |
 Worm   349 TRRCRASVVDLFVGFLDYYATY---FDY----------STNV-IQMVSKKLEFKPDRW------C 393

  Fly   508 SIQLKKPMVVQDPIQLNHNVTKAVTKYGLQTFVDYCQQTAELLEEPSTNWRQRYAF 563
                |.||.:.||.:.:||:.:.|.    ....:|.:...|..::..|:.|.|..|
 Worm   394 ----KYPMCIADPFETDHNLAQGVD----MPMFEYIRSCMEHSKKVFTDRRMRSEF 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TailorNP_001262327.1 DUF1439 <70..126 CDD:297551
NT_PAP_TUTase 245..364 CDD:143392 33/149 (22%)
pup-2NP_498100.1 NT_PAP_TUTase 163..264 CDD:143392 30/111 (27%)
TRF4 <169..>414 CDD:227585 65/280 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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