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Protein Alignment CG1943 and jpt1b
DIOPT Version :9
Sequence 1: | NP_001262326.1 |
Gene: | CG1943 / 40844 |
FlyBaseID: | FBgn0037468 |
Length: | 118 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005163766.1 |
Gene: | jpt1b / 402906 |
ZFINID: | ZDB-GENE-030131-2784 |
Length: | 158 |
Species: | Danio rerio |
Alignment Length: | 175 |
Identity: | 45/175 - (25%) |
Similarity: | 60/175 - (34%) |
Gaps: | 82/175 - (46%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTSTELKIGLTTSARPSSRVLKPPGGGH------------------TNIFSEPD----------- 36
||:|....|:...|:.|||||:||||.. ::||:|||
Zfish 1 MTTTTTFQGMEPGAKNSSRVLRPPGGASNISFGTEEEKPVRKNKMASSIFAEPDDPHAHRRNNPP 65
Fly 37 ----------------------------VAVPAP----RAKYNQQNSSNLNACMGSTDPNKVVEK 69
...|.| ..:|.|:|. |.:|...|
Zfish 66 GGEASGVLCGEPSAPLRRCQPAIVYDEGAGEPQPNHEDHHEYEQENH-------GESDFPPV--- 120
Fly 70 IREEVSIQKEEAKSAPPSQPKEPANKPAATNGEARGRVPPGGFSS 114
||...|||::.|| :.:|:|.|...| |.||||.||
Zfish 121 --EECVEQKEDSSSA--------SAQPSAGNASGR-RNPPGGKSS 154
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG1943 | NP_001262326.1 |
XRN_N |
<41..>92 |
CDD:251765 |
14/54 (26%) |
jpt1b | XP_005163766.1 |
JUPITER |
14..>97 |
CDD:293659 |
15/82 (18%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR34930 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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