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Protein Alignment CG1943 and jpt2
DIOPT Version :9
Sequence 1: | NP_001262326.1 |
Gene: | CG1943 / 40844 |
FlyBaseID: | FBgn0037468 |
Length: | 118 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_012825626.1 |
Gene: | jpt2 / 100216034 |
XenbaseID: | XB-GENE-971048 |
Length: | 192 |
Species: | Xenopus tropicalis |
Alignment Length: | 193 |
Identity: | 54/193 - (27%) |
Similarity: | 74/193 - (38%) |
Gaps: | 76/193 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTSTELKIGLTTSARPSSRVLKPPGGGHTNIFSEPDVAVPAPRAKYNQ----------------- 48
||||....||.:.::||||||||||||.:.|||..| ..|||...:..
Frog 1 MTSTHSFQGLDSESKPSSRVLKPPGGGSSCIFSGSD-ETPAPSRSHKMASNIFGSQAEPENMSKR 64
Fly 49 ------------------QNSSNLNACMG-----------STDPNKVVEKIREEVSIQKEEA--- 81
|.:|.:|...| :|.|.....|.::.::|.:.:|
Frog 65 SNPPGGKPSGIFQEPDPVQAASRVNPPGGKGSNIFGEAKLTTSPKAHPNKPKDNINIFETDASKG 129
Fly 82 ----KSAP-PSQPKE---PANK--------PAATNGE--------ARGRV--PPGGFSSGGFW 118
|:|| |::|:| |..| ||....| :..|| ||||.||..|:
Frog 130 STPVKAAPSPAKPQEQKIPVAKEEKVVVPDPALAAHEPHLGPRPRSHNRVLNPPGGKSSVTFY 192
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG1943 | NP_001262326.1 |
XRN_N |
<41..>92 |
CDD:251765 |
17/107 (16%) |
jpt2 | XP_012825626.1 |
JUPITER |
10..188 |
CDD:293659 |
46/178 (26%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
47 |
1.000 |
Inparanoid score |
I5289 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1620782at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0007420 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X4211 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 4.060 |
|
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