DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1943 and jpt1a

DIOPT Version :9

Sequence 1:NP_001262326.1 Gene:CG1943 / 40844 FlyBaseID:FBgn0037468 Length:118 Species:Drosophila melanogaster
Sequence 2:NP_001082982.1 Gene:jpt1a / 100037360 ZFINID:ZDB-GENE-070410-142 Length:162 Species:Danio rerio


Alignment Length:164 Identity:47/164 - (28%)
Similarity:62/164 - (37%) Gaps:56/164 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTSTELKIGLTTSARPSSRVLKPPGGGH------------------TNIFSEP------------ 35
            ||:|....|:..:||.|||||:|||||.                  ::||:||            
Zfish     1 MTTTTTYQGMDPTARNSSRVLRPPGGGSNICFGTDEEKPVKKNKMASSIFAEPEDPHAHRRNNPP 65

  Fly    36 ----------DVAVPAPRAKYNQQNSSN--------LNACMGSTDPNKV-VEKIREEVSIQKEEA 81
                      :.:.|..|......|.||        :|...|...|..| ..:..|.|..|.|.|
Zfish    66 GGNPTGVLCGEPSAPLRRCTAQPVNHSNSMVNNNLPVNGENGDEGPISVDCTEEPEPVQEQNETA 130

  Fly    82 KSAPPSQPKEP-ANKPAATNGEARGRVPPGGFSS 114
            .|:..|..:|| |..|::.      |.||||.||
Zfish   131 ASSSLSTTEEPAAGLPSSR------RNPPGGKSS 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1943NP_001262326.1 XRN_N <41..>92 CDD:251765 15/59 (25%)
jpt1aNP_001082982.1 JUPITER 14..>55 CDD:293659 16/40 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR34930
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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