DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1965 and gcfc2

DIOPT Version :9

Sequence 1:NP_649689.1 Gene:CG1965 / 40842 FlyBaseID:FBgn0037466 Length:905 Species:Drosophila melanogaster
Sequence 2:XP_002936033.2 Gene:gcfc2 / 100216244 XenbaseID:XB-GENE-5999584 Length:873 Species:Xenopus tropicalis


Alignment Length:989 Identity:267/989 - (26%)
Similarity:420/989 - (42%) Gaps:243/989 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFRKPKK-IQRRVFSSNADEEEDGASLDPDAEMEAPPPPIISGKR---EKEKSRKAIKPQEDN-- 61
            :|||||: |:.|...|:.:||.:..|..|.|..:..|    :|:.   ..|:.::|...|.|.  
 Frog     1 MFRKPKRAIRVRKAESSEEEEREEESEQPRAREQRRP----AGRGLFCGTERGKRAEAAQGDGAG 61

  Fly    62 --------------------------------------------------------SKPKALLSF 70
                                                                    :.|..||||
 Frog    62 SDAARRDGAGSDAARRDGAGSDAARRDGAGSDAEGEPDPSETVGTAPVEPEFSIRFTAPPTLLSF 126

  Fly    71 ADDEDDGE-----------VFQVRKSSHSKKVMRMLDKERRKKKREERAENSGHPGGENGSTQHL 124
            |::.:|.:           ||||:|.:....:::...|||..|...:          .:...:.|
 Frog   127 AEEREDADFKIKKPSVNAVVFQVQKKTEKNSIIKSYKKERAAKTESD----------SDSEVEGL 181

  Fly   125 ESSGGPSSGPPNSNSNPANAGRYKSASDQSKSKKSDNHMIQTEIRTDDFVLVVKKSETPEAILNG 189
            |..|..|....:|..........||.|:.|...::.:...|            ::|::|.:.:. 
 Frog   182 EEDGAKSKSDSSSELEDQREDGAKSESNSSSEVENKDPQPQ------------ERSDSPNSGMG- 233

  Fly   190 RAALCAGREDMSDEEDQQSEDGGHDKTRHRFSKPEHLKQMLESGSIPDAAMIHAARKRRQRAREQ 254
                          ....|.|.|                  .:|:||.|.:|.|||:||:.||.|
 Frog   234 --------------SSPTSPDSG------------------ITGAIPGAKVIRAARRRRRLARAQ 266

  Fly   255 GAGDYIPIEEPKEPAKLSNRLPCEDVEGDQSDDEERMDMNDITGRKEREERREQFYAVENDSTDG 319
              ||||||...:|.:..|......|:     ||.||. :....|.|...|:.|:..:..:||...
 Frog   267 --GDYIPIGTKQEMSSSSQSESDSDI-----DDHERR-IKFAPGTKTLREQMEEEMSSNSDSEMH 323

  Fly   320 DSDRE---MNEWENQQIRKGVTAAQLVHSQHETVLSRFMIKPAPSGIGTGMDDGDSTAAQSTSTL 381
            .|:.|   .::||.|||||.|...:                        |||:.           
 Frog   324 KSEDEEDLQDKWEEQQIRKAVKYQK------------------------GMDED----------- 353

  Fly   382 LEQAYAKNALERTNLAAAVRSSVKTKKEKAKATALR--TPQEILAAIQSRLSELKERSADHSASM 444
            |.|               ||...|:||......:|.  |.::|...:.|||:...|....|.|..
 Frog   354 LPQ---------------VRIPPKSKKSVEPRISLPPVTAEDIKKKLASRLNSFHEVHRAHVAER 403

  Fly   445 ARISTELKALK--LQQLECQQNAPTAAAKYKFYQEIKCYVNDLVDCLSEKAPVIYDLEKRALQQY 507
            .:..::|.:.|  |::||...:..|    |||::|:|.||.:.|||::||...|..||...::.:
 Frog   404 EKYVSDLDSAKTTLEKLEMSSSEQT----YKFFKEMKTYVENFVDCVNEKIAQINRLELEMIEIF 464

  Fly   508 GKNQRYLVNRRRQDVRDQAKEIAESAKPITAASRRTPDYEEQVRRAAEREGRRTRRRCER-ERND 571
            .|....|..||:.|:|:::..: ::......|:.:|.|.      ..:.|.||.:||.:| |..|
 Frog   465 QKRAESLNKRRQDDLRNESVAV-QNISGTKDANGQTTDL------MTDCELRRKKRRQKRKECGD 522

  Fly   572 LLSSHLDGMSSDDEIADQQQELSVTTMAQIESQSVDALEDVTDDFSKIELILMKFFAWRKTDMSS 636
              |.|.:|||||||::...:.........|.:||....|||.:||.:|:.||.:|..||.....|
 Frog   523 --SDHYEGMSSDDELSTDDERSFQKNRESIRAQSKTIFEDVHEDFHQIKNILSRFTEWRGRFPES 585

  Fly   637 YQDAFVSLCLPKVLAPLVRHELVLWSPLLDVYADIENMRWYQACMLYASQADETVEQLKIDPDIN 701
            |.||::||||.|:|.|::|..|:.|:||.| ..|:|.|.|||....:..:.:| :|....:.|..
 Frog   586 YYDAYISLCLHKLLNPIIRVHLLDWNPLED-KKDLEEMTWYQDLEEFCYRENE-LEMNDENSDHK 648

  Fly   702 LVPALIEKIVLPKVTALVTECWDPLSTTQTLRLVGFINRLGREFPLSGTNKQLNKLFESIMERMR 766
            ::.|:|||.|:|||:..|...|||||..||..|..|.....:.   :.::|.:..|...::..|:
 Frog   649 VLSAVIEKTVIPKVSGFVELLWDPLSAVQTDNLAHFCKTNVKH---NESSKAVQGLINCLLSTMK 710

  Fly   767 LALENDVFIPIFPKQVQEAKTS----FFQRQFCSGLKLFRNFLSWQGILADKLLRELAIGALLNR 827
            .|:|:|||||:|||::.|.:.|    |.:|:|.|.:|:|:|.|.|.|.|.::.|:||::..||||
 Frog   711 KAIEDDVFIPLFPKRLLEDRFSPHSRFQERRFWSAVKMFQNVLCWDGFLQEETLQELSLDKLLNR 775

  Fly   828 YLLLAMRVCTPN-DAINKAYIIVNTLPTVWLLPNSETLKNMELFIGYIKQTLENCDASNPIFMQS 891
            ||||.:....|. |::.|...:|..||..| ..|.|:..::...:.:                  
 Frog   776 YLLLVILNAEPGPDSVKKCKRVVECLPQSW-FRNLESGSSLHRLLNF------------------ 821

  Fly   892 SDKAKQILQRLHSL 905
               :|.:||.:|:|
 Frog   822 ---SKHLLQSIHTL 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1965NP_649689.1 GCFC 619..829 CDD:285127 83/213 (39%)
gcfc2XP_002936033.2 GCFC 571..777 CDD:285127 82/210 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52604
OrthoDB 1 1.010 - - D1217358at2759
OrthoFinder 1 1.000 - - FOG0002728
OrthoInspector 1 1.000 - - otm47839
Panther 1 1.100 - - LDO PTHR12214
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2522
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.030

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