DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1965 and paxbp1

DIOPT Version :9

Sequence 1:NP_649689.1 Gene:CG1965 / 40842 FlyBaseID:FBgn0037466 Length:905 Species:Drosophila melanogaster
Sequence 2:XP_012813468.1 Gene:paxbp1 / 100145438 XenbaseID:XB-GENE-974036 Length:883 Species:Xenopus tropicalis


Alignment Length:973 Identity:308/973 - (31%)
Similarity:473/973 - (48%) Gaps:185/973 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFRKPKKIQRRVFSSNADEEE--DGASLDPDAEMEAPPPPIISGKREKEKSRKAIKP-------- 57
            :|||.:::..|..:.:.|||.  |..|..|.||   |..|:.| ..|...|...:.|        
 Frog     1 MFRKARRVNVRKRNDSEDEEREADANSAAPAAE---PSEPVFS-VFEHPVSIPLLGPDTGPPRGK 61

  Fly    58 QEDNS--KPKALLSFADDEDDGEVFQVRKSSHSKKVMRMLDKERRKKKREERAENSGHPGGENGS 120
            :|.||  ...:||||.||:||.|:|:|:||:||||:::||.||                      
 Frog    62 KEGNSVMSKGSLLSFQDDDDDEEIFKVKKSNHSKKIVKMLKKE---------------------- 104

  Fly   121 TQHLESSGGPSSGPPNSNSNPANAGRYKSASDQSKSKKSDNHMIQTEIRTDDFVLVVKKSETPEA 185
                                      ||...:::|.|.|.|    :.:..|.|   :.:|..|:.
 Frog   105 --------------------------YKDDLEKTKPKASGN----STVDGDSF---MNRSLPPKD 136

  Fly   186 ILNGRAALCA--GREDM---SDEEDQQSEDGGHDKTRHRFSKPEHLKQMLESGSIPDAAMIHAAR 245
            .:....|:.:  |.|:|   |::|:::.:.|.       |:.......:|..|.|||||.|||||
 Frog   137 GIQEDIAVGSDLGEEEMEVESEKEEEKPKAGS-------FTNAVSSLNVLRPGEIPDAAFIHAAR 194

  Fly   246 KRRQRAREQGAGDYIPIEEPKEPAKLSNRLPCEDVEGDQSDDEERMDMNDITGRKEREERREQFY 310
            |:||.|||.|..   |..:.:...|  :||..|| |.|.||||:......:...:|:.:|::...
 Frog   195 KKRQMARELGDA---PSVDGEGGGK--SRLVRED-ENDASDDEDDDKRRIVFSVREKSQRQKIAE 253

  Fly   311 AVENDSTD------GDSDREMNEWENQQIRKGVTAAQLVHSQ-HETVLSRFMIKPAPSGIGTGMD 368
            .:..:.:|      ||.|.|::.||.:|||||::..|:...| .||    .|..|:..   .||.
 Frog   254 EIGIEGSDDEALATGDQDEELSRWEQEQIRKGISIPQVQAPQPPET----NMFYPSTY---QGMP 311

  Fly   369 DGDSTAAQSTSTLLEQAYAKNALERTNLAAAVRSSVKTKKEKA-KATALRTPQE---------IL 423
            .|.|.....|                   .|...|.:||.:|. .:.:.:||..         :.
 Frog   312 YGTSYGVPYT-------------------YAAYGSTETKSQKPDNSVSFKTPSNEMTPVTIDLVK 357

  Fly   424 AAIQSRLSELKERSADHSASMARI-----STELKALKLQQLE-CQQNAPTAAAKYKFYQEIKCYV 482
            ..::.||..:||   .|.|::.:.     |.|.....:.:|| |   :.:.|.:|:|.||::.||
 Frog   358 KQLKDRLDAMKE---VHKANLEQYEKHVQSREDSTSSISRLEGC---SGSNAERYQFLQEMRGYV 416

  Fly   483 NDLVDCLSEKAPVIYDLEKRALQQYGKNQRYLVNRRRQDVRDQAKEI-AESAKPITAAS-----R 541
            .||::|..||.|:|.:||....|.|.:....||.||:.|::|::.|. :.|:|.:.|.:     |
 Frog   417 QDLLECFREKVPLINELESAMHQLYKQRAARLVQRRQDDIKDESSEFSSHSSKAVMAPNLDPFGR 481

  Fly   542 RTPDYEEQV--RRAAEREGRRTRRRCERERNDLLSSHLDGMSSDDEIADQQQELSVTTM----AQ 600
            ....::|..  ||.||||.||||||..||.....:.||:|:|||||    :....:|..    .:
 Frog   482 DRALFQEHAKQRRIAEREARRTRRRQAREVPGKTAEHLEGLSSDDE----ETSTDITNFNMEKDR 542

  Fly   601 IESQSVDALEDVTDDFSKIELILMKFFAWRKTDMSSYQDAFVSLCLPKVLAPLVRHELVLWSPLL 665
            |..::....||..::|..||.|..:|.:||.|..|:|:||::.|||||:|.||||.:|:.|:||.
 Frog   543 ILKEAGKVFEDTLENFHSIEYIKDQFESWRSTYYSTYKDAYIGLCLPKLLNPLVRIQLLTWNPLE 607

  Fly   666 DVYADIENMRWYQACMLYASQADETVEQLKIDPDINLVPALIEKIVLPKVTALVTECWDPLSTTQ 730
            ....:.|:|.|::..:.|..   |..|..|.|.||.|:|:|:||::|||:..:....|||.||||
 Frog   608 ANCCNFESMMWFECLLFYGC---EEKEYDKEDVDIVLLPSLVEKVILPKLAGIAENVWDPFSTTQ 669

  Fly   731 TLRLVGFINRLGREFP--LSGTNKQLNKLFESIMERMRLALENDVFIPIFPKQVQEAKTS----F 789
            |.||...:.:|...:|  |:..||....|.::::.|||..|::|||:|::||.|.|.|.|    |
 Frog   670 TNRLAAVVQKLVNGYPTVLNSENKNTEALLKALLARMRRTLDDDVFMPLYPKNVIENKNSAPCIF 734

  Fly   790 FQRQFCSGLKLFRNFLSWQGILADKLLRELAIGALLNRYLLLAMRVCTPN-----DAINKAYIIV 849
            |||||.|.:||..|||.|.|:|::|.|:||::..|||||:|:|.:    |     |:|.||..::
 Frog   735 FQRQFWSSVKLLGNFLKWHGVLSNKALQELSVDGLLNRYILMAFQ----NNENGEDSIKKAQSVI 795

  Fly   850 NTLPTVWL--LPNSETLKNMELFIGYIKQTL-----ENCDASNPIFMQSSDKAKQILQRLHSL 905
            ...|..|.  |...:|:..:|.|..|:....     .|...|:.....:.::.:||::.|.|:
 Frog   796 TCFPRQWFANLKGGKTIPQLENFARYLTHLAGTIYRNNVGCSDIERRNAREQIRQIVKLLASI 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1965NP_649689.1 GCFC 619..829 CDD:285127 96/215 (45%)
paxbp1XP_012813468.1 GCFC 561..772 CDD:369552 94/213 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 187 1.000 Domainoid score I3284
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H9604
Inparanoid 1 1.050 378 1.000 Inparanoid score I2031
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1217358at2759
OrthoFinder 1 1.000 - - FOG0002728
OrthoInspector 1 1.000 - - otm47839
Panther 1 1.100 - - O PTHR12214
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2522
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

Return to query results.
Submit another query.