DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1105 and LDB19

DIOPT Version :10

Sequence 1:NP_649688.1 Gene:CG1105 / 40841 FlyBaseID:FBgn0037465 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_014967.3 Gene:LDB19 / 854500 SGDID:S000005849 Length:818 Species:Saccharomyces cerevisiae


Alignment Length:351 Identity:69/351 - (19%)
Similarity:107/351 - (30%) Gaps:128/351 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SEEKSVTTSEGKTENEVTQLKGHEEYFKIQYYLLGGKNSSETELPPGTHTYPFTCALPPNLPSSF 117
            :|:||:..:|.........||....:.......|...::|.:.:.|.|.:   |.......|::.
Yeast    69 AEDKSLKNTESNVSTTSKSLKRKSTFGSALSSRLSSLSASTSNISPSTSS---TSISHSPTPANL 130

  Fly   118 EGEFGHVRYTI-KVTLDRPWKFDQDMKMAFTVIAPVDLNLNPRVKEPFKLELEKSFCCFCCRSGP 181
            ....|:.:.|| .|||....|.                    ...:||...:.....|..|::  
Yeast   131 RIMAGYTKITITSVTLSLVQKI--------------------HFHKPFVPNISSMQTCMNCKT-- 173

  Fly   182 LAVITNI-------------------PQTGFVSGQVLPITCEVDNTSNVNLTAVKFELRKLVTF- 226
              .|||:                   |.:..:.|.| |.:..:..|:.   |.||:||..:||: 
Yeast   174 --KITNMKSWEIQSNTQDLSVGSHSYPFSYLIPGSV-PCSSSLGATAE---TQVKYELIAVVTYI 232

  Fly   227 --HTNQ-------PRSEKRESKVIIANLSVGPVNGGESRTFTQQMEIPALPPTNLLNCGIIALDY 282
              |.|.       ||.|...||..:..|:: |:....|        ||..|..|.|.        
Yeast   233 DPHRNSFSSGHSTPRKEGSSSKKRLLQLAM-PIAVTRS--------IPRGPDKNSLR-------- 280

  Fly   283 DLHVECEVSGPHRNLTGKVPITLGTIPLAGVRPPTQFTDA---PSAVQSEDPSLAPTQPVSPASP 344
                                          |.|||:.|.|   |:.|..:.     |.|:.... 
Yeast   281 ------------------------------VFPPTELTAAAVLPNVVYPKS-----TFPLEMKL- 309

  Fly   345 PGGDGVGGA--------LGWNVADST 362
               |||...        |.|.:.::|
Yeast   310 ---DGVSSGDRRWRMRKLSWRIEETT 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1105NP_649688.1 Arrestin_N 6..155 CDD:425619 19/102 (19%)
Arrestin_C 178..310 CDD:214976 30/160 (19%)
LDB19NP_014967.3 LDB19 144..346 CDD:404030 54/273 (20%)

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