DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1105 and ROD1

DIOPT Version :10

Sequence 1:NP_649688.1 Gene:CG1105 / 40841 FlyBaseID:FBgn0037465 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_014661.1 Gene:ROD1 / 854183 SGDID:S000005544 Length:837 Species:Saccharomyces cerevisiae


Alignment Length:342 Identity:69/342 - (20%)
Similarity:113/342 - (33%) Gaps:101/342 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NGQVKFTFDS-------PKKVRGIIIRFLGEANTEWSEEKSVTTSEGKTENEVTQLKGHEEYFKI 81
            ||::..:..|       ||:.|.:....|..:|.:.|..|:..|                     
Yeast   114 NGKITISSKSSTNLAALPKRKRALSTASLISSNGQTSASKNYHT--------------------- 157

  Fly    82 QYYLLGGKNSSETELPPGTHTYPFTCALPPNLPSSFEG-EFGHVRYTIKVTLDRPWKFDQDMKMA 145
                          |..|.:.:||:..:|.:|..|.|| ....|.|.::.|::||.:.|...|..
Yeast   158 --------------LVKGNYEFPFSAIIPGSLVESVEGLPNAAVTYALEATIERPKQPDLICKKH 208

  Fly   146 FTVIA-----PVDLNLNPRVKE--PFKLELEKSFCCFCCRSGPLAVITNIPQTGFVSGQVL-PIT 202
            ..||.     .|:|:....|..  |.|::...|........|...:| ||.....:.|..| |:.
Yeast   209 LRVIRTLAIDAVELSETVSVDNSWPEKVDYTISIPTKAIAIGSSTMI-NILIVPILKGLKLGPVR 272

  Fly   203 CE-VDNTS---------NVNLTAVKFELRKLVTFHTNQPRSEKRESKVIIANLSVGPVNGGESRT 257
            .. |:|:.         |......|.:|:..:. |..|.:.::        :|:.....|.::.|
Yeast   273 ISLVENSQYCGSYGGVINQERMVAKLKLKDPLK-HVAQIKKKR--------SLNEAADEGVDTDT 328

  Fly   258 --FTQQMEIPAL--PPTNLLNCG------------------IIALDYDLHVECEVSGPHRNLTGK 300
              |..:.|:.||  .|.:|..|.                  |..|:.|.|:.        .|...
Yeast   329 GEFQDKWEVRALLNIPASLTKCSQDCRILSNIKVRHKIKFTISLLNPDGHIS--------ELRAA 385

  Fly   301 VPITLGTIPLAGVRPPT 317
            :|:.|...|...|...|
Yeast   386 LPVQLFISPFVPVNVKT 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1105NP_649688.1 Arrestin_N 6..155 CDD:425619 30/143 (21%)
Arrestin_C 178..310 CDD:214976 31/164 (19%)
ROD1NP_014661.1 Arrestin_N <157..215 CDD:451447 19/92 (21%)
Arrestin_C 232..395 CDD:214976 34/180 (19%)

Return to query results.
Submit another query.