DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1105 and Arrdc1

DIOPT Version :10

Sequence 1:NP_649688.1 Gene:CG1105 / 40841 FlyBaseID:FBgn0037465 Length:422 Species:Drosophila melanogaster
Sequence 2:XP_038961503.1 Gene:Arrdc1 / 366001 RGDID:1309961 Length:460 Species:Rattus norvegicus


Alignment Length:378 Identity:93/378 - (24%)
Similarity:159/378 - (42%) Gaps:55/378 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ELQLDNPWNTYYAGQTVNGQVKFTFDSPKKVRGIIIRFLGEANTEWSEEKSVTTSEGKTENEVTQ 71
            |::|......|..|:.:.|.|.....:|...|.|.:..:|....      |...::|....|   
  Rat     8 EIRLSQGRVVYSPGEPLAGAVHLRLGAPLPFRAIRVTCMGSCGV------SNKANDGAWVVE--- 63

  Fly    72 LKGHEEYFKIQYYLLGGKNSSETELPPGTHTYPFTCALPPNLPSSFEGEFGHVRYTIKVTLDRPW 136
                |.||.....|     :.:..||||.|.:||...||...|:||||.||.:.:.::.::|.| 
  Rat    64 ----ESYFNSSLSL-----ADKGSLPPGEHNFPFQFLLPATAPTSFEGPFGKIVHQVRASIDTP- 118

  Fly   137 KFDQDMK--MAFTVIAPVDLNLNPRVKEPFKLELEKSFCCFCCRSGPLAVITNIPQTGFVSGQVL 199
            :|.:|.|  :.|.:::|::||..|.:::|......|.|.....::|.:.:..:....|:|.||||
  Rat   119 RFSKDHKCSLVFYILSPLNLN
SIPDIEQPNVASTTKKFSYKLVKTGSVVLTASTDLRGYVVGQVL 183

  Fly   200 PITCEVDNTSNVNLTAVKFELRKLVTFHTNQPRSEKRESKVIIANLSVGPVNGGESRTFTQQMEI 264
            .:..:::|.|..:.:.|...|.:.|::...:...:.|    .||.:....|.......:.:|:.:
  Rat   184 RLQADIENQSGKDTSPVVASLLQKVSYKAKRWIYDVR----TIAEVEGTGVKAWRHAQWQEQILV 244

  Fly   265 PALPPTNLLNCGIIALDYDLHVEC----------------------EVSGPHRNLTGKVPITLGT 307
            ||||.:.|..|.:|.:||.|.|.|                      :||......|..:|:.:|.
  Rat   245 PALPQSALPGCSLIHIDYYLQVWCCPGLGGLRLGGLGLTLQYLRFFQVSMKAPEATVTLPLFVGN 309

  Fly   308 IPLAGVRPPTQFTDAPSAVQSEDPSLAPTQPVSPASPPGGDGVGGALGWNVAD 360
            |.:      .|...:|.......|.|  ..||.|::||..:....|.|.:.:|
  Rat   310 IAV------NQTPLSPCPGPGSSPGL--LSPVVPSAPPQEEAEAVASGPHFSD 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1105NP_649688.1 Arrestin_N 6..155 CDD:425619 40/149 (27%)
Arrestin_C 178..310 CDD:214976 35/153 (23%)
Arrdc1XP_038961503.1 Arrestin_N 7..139 CDD:451447 40/149 (27%)
Arrestin_C 162..310 CDD:460676 34/151 (23%)
PHA03247 <311..449 CDD:223021 12/52 (23%)

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