DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1105 and arrdc2

DIOPT Version :10

Sequence 1:NP_649688.1 Gene:CG1105 / 40841 FlyBaseID:FBgn0037465 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_956233.1 Gene:arrdc2 / 335206 ZFINID:ZDB-GENE-030131-7146 Length:407 Species:Danio rerio


Alignment Length:347 Identity:103/347 - (29%)
Similarity:172/347 - (49%) Gaps:20/347 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LKGCELQLDNPW----NTYYAGQTVNGQVKFTFDSPKKVRGIIIRFLGEANTEWSEEKSVTTSEG 63
            ||..::..|:|.    ..|.:|..|:|:|...|.:..|:..:.:...|.|...|:|.:|..:|..
Zfish     6 LKKFDIVFDSPEMDCPPVYSSGDVVSGKVVLEFSAESKIDSLKLHAEGFAKVHWTESRSAGSSTA 70

  Fly    64 KTENEVTQLKGHEEYFKIQYYLLGGKNSSETELPPGTHTYPFTCALP-PNLPSSFEGEFGHVRYT 127
            .|:|...::    ||...:..||...|...|.:|.|.|.|||:..|| ..|.:||||:.|.:||.
Zfish    71 YTQNYSDEV----EYLNRREVLLQADNGDLTVIPAGRHEYPFSFQLPEETLVTSFEGKHGSIRYW 131

  Fly   128 IKVTLDRPWKFDQDMKMAFTVIAPVDLNLNPRVKEPFKLELEKSFCCFCCRSGPLAVITNIPQTG 192
            :||.|.|||...:.:|..||||.|:|:| .|.:..|.....:|....:....|.:::...|.:.|
Zfish   132 VKVKLHRPWATVKKIKKEFTVIEPIDIN-TPSLLAPQAGTKDKMARIWYRNCGQVSITAKIDRKG 195

  Fly   193 FVSGQVLPITCEVDNTSNVNLTAVKFELRKLVTFHTNQPRSEKRESKVIIANLSVGPVNGGESRT 257
            :..|:|:|:..|.||:::.::.. |..:.:..||..   |...::.:.::|.| .|.:.|...|.
Zfish   196 YTPGEVIPVFAEFDNSTSRSVVP-KAYITQTQTFIA---RGTMKQKRAVVATL-CGDIVGPRRRE 255

  Fly   258 --FTQQMEIPALPPTNLLNCGIIALDYDLHVECEVSGPHRNLTGKVPITLGTIPLAGVRPPTQFT 320
              ..:.::||.:.| ::|.|.||.::|.|.|..:|.|..: |:.::|:.:|||||......|...
Zfish   256 TWHGRAIKIPPVGP-SILQCRIIKVEYMLRVCVDVPGTSK-LSLELPLVMGTIPLHPFGSRTSSV 318

  Fly   321 DAPSAVQSEDPSLA-PTQPVSP 341
            .:..:|..|...:| |.||..|
Zfish   319 SSQYSVNMEWLRMAIPEQPEPP 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1105NP_649688.1 Arrestin_N 6..155 CDD:425619 52/153 (34%)
Arrestin_C 178..310 CDD:214976 35/133 (26%)
arrdc2NP_956233.1 Arrestin_N 9..159 CDD:425619 52/153 (34%)
Arrestin_C 183..308 CDD:214976 35/131 (27%)

Return to query results.
Submit another query.