DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1105 and arrd-8

DIOPT Version :10

Sequence 1:NP_649688.1 Gene:CG1105 / 40841 FlyBaseID:FBgn0037465 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_496568.1 Gene:arrd-8 / 189457 WormBaseID:WBGene00012467 Length:364 Species:Caenorhabditis elegans


Alignment Length:378 Identity:98/378 - (25%)
Similarity:167/378 - (44%) Gaps:69/378 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LQLDNPWNTYYAGQTVNGQVKFTFDSPKKVRGIIIRFL--GEANTEWSEEKSVTTSEGKTENEVT 70
            ::.|:|...|..||.|.|  |.|..:...:..:.::..  |:..|.|.          |.||   
 Worm     8 IEFDHPAAVYSPGQNVAG--KLTIRNRNALNALALKICIHGDIETLWR----------KFEN--- 57

  Fly    71 QLKG----HEEYFK----IQY----YLLGG-------KNSSETELPPGTHTYPFTCALPPNLPSS 116
              ||    |..:::    |.|    .:|.|       ..::..::|.|.:.:||...||.|||.|
 Worm    58 --KGRYDRHGRWYRSSEHINYTSKINVLEGIAQPWSSIENANNKIPGGVNIFPFLFQLPANLPPS 120

  Fly   117 FEGEFGHVRYTIKVTLDRPWKFDQDMKMAFTVIAPVDLNLNPRVKEPFKLELEKSFCCFCCRSG- 180
            |||..|:|||::.|.|||||:.:.:.|..|:||..:|||..|:...|.       ....|..|| 
 Worm   121 FEGTHGNVRYSVHVELDRPWRMNVEAKRVFSVIPVIDLN
SIPKTINPM-------IVSSCKHSGL 178

  Fly   181 ----PLAVITNIPQTGFVSGQVLPITCEVDNTSNVNLTAVKFELRKLVTFHTNQPRS-------- 233
                .:.|..:||::|::.|:.:.::..:.|.:...:.::|.:|.:.|.:...|..|        
 Worm   179 FSNKEVKVKISIPKSGYIPGETIQVSALIQNHTKKPIYSIKAKLEQHVHYQAQQENSHLFPEEHC 243

  Fly   234 -EKRESKVIIANLSVGPVNGGESRTFTQQMEIPALPPTNLL---NCGIIALDYDLHVECEVSGPH 294
             :..|.|.....:|....:.........|:.:|.:.|..|:   ..|||.:||.:.|:.   |.:
 Worm   244 HKHCEHKTAQTTMSKVEKSCHVEFCSNSQINVPLVLPNQLVPSFRTGIIEVDYCIIVDI---GEN 305

  Fly   295 RNLTGKVPITLGTIPLAGVRPPTQF--TDAPSAVQSEDPSLAPTQPVSPASPP 345
            :.|..::|||:||||:.....|..:  |:||...::....:..:|..:|  ||
 Worm   306 KKLRCELPITVGTIPIGVFTRPIAYSITEAPPKYENFSQIVEDSQASAP--PP 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1105NP_649688.1 Arrestin_N 6..155 CDD:425619 50/167 (30%)
Arrestin_C 178..310 CDD:214976 34/148 (23%)
arrd-8NP_496568.1 Arrestin_N 6..159 CDD:425619 50/167 (30%)
Arrestin_C 180..320 CDD:214976 31/142 (22%)

Return to query results.
Submit another query.