DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1105 and arrd-12

DIOPT Version :10

Sequence 1:NP_649688.1 Gene:CG1105 / 40841 FlyBaseID:FBgn0037465 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001309576.1 Gene:arrd-12 / 187636 WormBaseID:WBGene00011053 Length:186 Species:Caenorhabditis elegans


Alignment Length:177 Identity:55/177 - (31%)
Similarity:87/177 - (49%) Gaps:10/177 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DNPWNTYYAGQTVNGQVKFTFDSPKKVRGIIIRFLGEANTEWSEEKSVTTSEGKTENEVTQLKGH 75
            |.|...|.|||.::|:|.|:..|.:..|.|.::..|.::|.::.::|.|.:..|.|:|.   |.|
 Worm     9 DKPNAVYAAGQKISGRVVFSTASQQNPRWIDVQLHGRSHTFFTRQESETKTNSKGESET---KTH 70

  Fly    76 E-EYFKIQYYL-----LGGKNSSETELPPGTHTYPFTCALPPN-LPSSFEGEFGHVRYTIKVTLD 133
            . .|.....:|     |..|......|.||.:.:.|...||.: ||.||||..|::||.::..:.
 Worm    71 TVHYTATAKHLDTAVPLWRKTDKAARLLPGKYEWQFWFQLPCSVLPPSFEGNNGNIRYWVRAEVS 135

  Fly   134 RPWKFDQDMKMAFTVIAPVDLNLNPRVKEPFKLELEKSFCCFCCRSG 180
            |.|||:...:.:|.:...:|||..|..:.|......|:..|.|.|:|
 Worm   136 RSWKFNIVDESSFEIAPFLDLN
TMPIARTPLDGFAVKNLGCCCFRNG 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1105NP_649688.1 Arrestin_N 6..155 CDD:425619 46/150 (31%)
Arrestin_C 178..310 CDD:214976 2/3 (67%)
arrd-12NP_001309576.1 Arrestin_N 6..157 CDD:451447 46/150 (31%)

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