DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1105 and arrd-3

DIOPT Version :10

Sequence 1:NP_649688.1 Gene:CG1105 / 40841 FlyBaseID:FBgn0037465 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_496010.2 Gene:arrd-3 / 187498 WormBaseID:WBGene00006429 Length:287 Species:Caenorhabditis elegans


Alignment Length:313 Identity:70/313 - (22%)
Similarity:118/313 - (37%) Gaps:58/313 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LDNPWNTYYAGQTVNGQVKFTFDSPKKVRGIIIRFLGEANTEWSEEKS----VTTSEGKTENEVT 70
            ||.....|...:.|.|.|........|.|.:.:...|...|.|.|.:.    |..|.|.......
 Worm     8 LDRDTCKYRPEECVTGNVVIINRKELKARTLRVYIKGYQKTSWKEIQQKPSLVVRSNGVNVKSTI 72

  Fly    71 QLKGHEEYFKIQY---YLLGGKNSSETE-LPPGTHTYPFTCALPPNLPSSFEGEFGHVRYTIKVT 131
            :||.|.|  .|||   |:.....:|:|: :.||||.:||:..||.:.|                 
 Worm    73 KLKSHGE--NIQYIHLYMTLWNFTSDTDCIKPGTHKFPFSFKLPADCP----------------- 118

  Fly   132 LDRPWKFDQDMKMAFTVIAPVDLNLN--PRVKEPFKLELEKSFCCFCCRSGPLAVITNIPQTGFV 194
                               |:..|..  |:..:.....:.|:...| .:||.::|.|:.||...:
 Worm   119 -------------------P
IVPNATYIPKDLQQINGAVSKNIGVF-FKSGIVSVKTSFPQRVLI 163

  Fly   195 SGQVLPITCEVDNTSNVNLTAVKFELRKLVTFHTNQPRSEKRESKVII-ANLSVGPVNGGESRTF 258
            :|:|:|:|..:||.|...:..|...:.::..|:........|:.|::| .:::|.|      .|.
 Worm   164 TGEVIPLTLLIDNKSTCTVREVGVRIFRIARFYAKDQEKMTRQRKIMIRKSINVEP------NTE 222

  Fly   259 TQQM-EIPALPPTNLLNCGIIALDYDLHVECEVSGPHRNLTGKV-PITLGTIP 309
            .|:: |.............:|.:.|.:||:...:...|.....| .:.:|..|
 Worm   223 QQELIEFKVHETVQTFESDLIEVKYLMHVDVFTTSAFRGTLNSVFSVIIGASP 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1105NP_649688.1 Arrestin_N 6..155 CDD:425619 35/152 (23%)
Arrestin_C 178..310 CDD:214976 31/135 (23%)
arrd-3NP_496010.2 Arrestin_N 4..>119 CDD:451447 34/148 (23%)
Arrestin_C 147..275 CDD:214976 30/133 (23%)

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