DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1105 and ttm-2

DIOPT Version :10

Sequence 1:NP_649688.1 Gene:CG1105 / 40841 FlyBaseID:FBgn0037465 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_494855.1 Gene:ttm-2 / 184995 WormBaseID:WBGene00017840 Length:358 Species:Caenorhabditis elegans


Alignment Length:361 Identity:81/361 - (22%)
Similarity:141/361 - (39%) Gaps:74/361 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LDNPWNTYYAGQTVNGQVKFTFDSPKKVRGIIIRFLGEA----------NTEWS---EEKSVTTS 61
            ||.|:  |..|||:.|.|......|.::..:..|..||.          |...|   ..|:....
 Worm    11 LDRPF--YQPGQTIQGHVVCEPHHPLEIDCVEGRLHGEIQYFQQLPPNHNRNGSPLPPSKTRVLI 73

  Fly    62 EGKTE----NEVTQLKGHEEYF---KIQYYLLGGKNSSETELPPGTHTYPFTCALPPNLPSSF-- 117
            :.|.:    ..|:::.|.:.::   :.:::.....::|.:.|.....|:|....||...|.||  
 Worm    74 DEKAQLWKYQTVSEMLGLDVFYDENQNRHFSSESASASSSSLFTTAATFPIQIELPHFAPPSFYC 138

  Fly   118 EGEFGHVRYTIKVTLDRPWKFDQDMKMAFTVIAPVDLNLN--PRVKEPFKLELEKSFCCFCCRSG 180
            .|....:|:|:::.|     ::|..|:|......|.||..  .|...|..:..:|:|        
 Worm   139 PGSPVSIRFTL
EIQL-----YNQGFKIASHEENLVVLNYESIKRQVTPKPVNFQKTF-------- 190

  Fly   181 PLAVITNIPQTGFVSGQVLPITCEVDNTSNVN--LTAVKFELRKLVTFHTNQPR---SEKRESKV 240
                  |.|:...:|.::|..|.....|:.:.  :|......:.|...|.|..|   :..:.::|
 Worm   191 ------NFPKERSISLEMLLPTDVFTTTARLENCITICNRWKQSLKYVHLNIVRRISALNQNNEV 249

  Fly   241 I----IANLSVG-----PVNGGESRTFTQQMEIPALPPTNLLNCGIIALDYDLHVECEVSGPHRN 296
            |    |....||     .:..||:.:|.....:|||||...:| |:...:|.|.|  .:...|..
 Worm   250 IDTVKIDTTGVGLPSKTKIAVGETYSFRPTFNVPALPPNIHVN-GLFKTEYSLKV--TIGRAHNF 311

  Fly   297 LTG--KVPITLGTIPLAGVRPPTQFTDAPSAVQSED 330
            :..  :||||:.|:..:..|          ::|.||
 Worm   312 VLASYEVPITIVTMDQSSRR----------SMQKED 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1105NP_649688.1 Arrestin_N 6..155 CDD:425619 36/166 (22%)
Arrestin_C 178..310 CDD:214976 35/147 (24%)
ttm-2NP_494855.1 Arrestin_N 7..149 CDD:451447 30/139 (22%)
Arrestin_C <231..326 CDD:214976 27/97 (28%)

Return to query results.
Submit another query.