DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1105 and arrd-28

DIOPT Version :10

Sequence 1:NP_649688.1 Gene:CG1105 / 40841 FlyBaseID:FBgn0037465 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_509710.2 Gene:arrd-28 / 184759 WormBaseID:WBGene00009000 Length:650 Species:Caenorhabditis elegans


Alignment Length:301 Identity:57/301 - (18%)
Similarity:103/301 - (34%) Gaps:79/301 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QVKFTFDS--PKKVRGIIIRFLGEANT-----EWSEEKSVTTSEGKTENEVTQLKGHEEYFKIQY 83
            :|.|..:|  ||::|.:.:...||...     |:...|::...                      
 Worm   350 EVTFIMNSVEPKELRSLRLILTGEVRVGGLWYEFLRFKAIANL---------------------- 392

  Fly    84 YLLGGKNSSETELPPGTHTYPF----------TCALPPNLPSSFEGEFGHVRYTIKV-TLDRPWK 137
                   |.||.|.||.|.:.|          |..|||.|     |:  .::|.|.. |:..|..
 Worm   393 -------SHETLLSPGEHNFRFQLPFADSQYDTSILPPTL-----GD--EIKYMIHASTVSLPKN 443

  Fly   138 FDQDMKMAFTVIAPVDLNLNPRVKEPFKLELEKSFCCFCCRSGPLAVITNIPQTGFVSGQVLPIT 202
            |.|......     ||..::...||.:|....:.:.         |...::.|..|..|:.:.:.
 Worm   444 FFQQQCELL-----VDRFIDTWAKEAYKPPYTEEYG---------ATKIHLSQRCFKRGKHVIVA 494

  Fly   203 CEVDNTSNVNLTAVKFELRKLVTFHTNQPRSEKRESKVIIANLSVGPVNGGESRTFTQQMEIPAL 267
            .:......|..|.|:.:..::.....::....:|..::...|:        ..:.....|.||..
 Worm   495 LQGSEPRYVKGTLVQKKRLRVPNVKLDESYCSQRNVRIFEENI--------HRKDHIHVMHIPFN 551

  Fly   268 PPTNLLNC--GIIALDYDLHVECEVSGPHRNLTGKVPITLG 306
            .|.::..|  .::.::|...||..:.|.|.: ...:||.:|
 Worm   552 IPPSIEICYWNVLQIEYHYEVEITLEGGHTH-NHSIPIWIG 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1105NP_649688.1 Arrestin_N 6..155 CDD:425619 32/146 (22%)
Arrestin_C 178..310 CDD:214976 22/131 (17%)
arrd-28NP_509710.2 Arrestin_C 153..278 CDD:214976
Blue background indicates that the domain is not in the aligned region.

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