DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-1 and AST2

DIOPT Version :9

Sequence 1:NP_001287203.1 Gene:Sodh-1 / 40836 FlyBaseID:FBgn0024289 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_011027.1 Gene:AST2 / 856838 SGDID:S000000903 Length:430 Species:Saccharomyces cerevisiae


Alignment Length:200 Identity:44/200 - (22%)
Similarity:76/200 - (38%) Gaps:54/200 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 HGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMI----IGHESAGV 71
            ||......|.:....|:.:::::.::.||:...|:. :.:|      .|||:.    ||.|.:||
Yeast    59 HGPITFSYENKIKLPISKNKLVVQVNYVGLNPVDMK-IRNG------YTKPIYGEAGIGREYSGV 116

  Fly    72 VAKLGKKVTT-LKVGDRV------------------AIEPGV-PCRKCDHCKQGKYNLCP----G 112
            :..:|..:|. ..|||.|                  .|:|.| |.     ..:.|..|.|    |
Yeast   117 ITHVGDNLTNRWNVGDDVYGIYYHPKLAIGALQSSLLIDPRVDPI-----LMRPKNTLSPEKAAG 176

  Fly   113 MVFCATPPYDGNLTRYYKHAADFCFKLPDHVTMEEGALLE--PLSVGVHACK--RAEVTLGSKVL 173
            .:||.....  ||....|.        .|.:..|...|:.  ..|||:.|.:  :....:..|::
Yeast   177 SLFCLGTAL--NLLAQLKE--------KDQLNTESNVLINGGTSSVGMFAIQLLKRYYKVSKKLV 231

  Fly   174 ILGAG 178
            ::.:|
Yeast   232 VVTSG 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-1NP_001287203.1 PLN02702 4..346 CDD:215378 43/199 (22%)
sorbitol_DH 8..349 CDD:176188 43/199 (22%)
AST2NP_011027.1 AST1_like 50..427 CDD:176209 43/199 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343140
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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