DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-1 and SOR2

DIOPT Version :9

Sequence 1:NP_001287203.1 Gene:Sodh-1 / 40836 FlyBaseID:FBgn0024289 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_010035.1 Gene:SOR2 / 851351 SGDID:S000002405 Length:357 Species:Saccharomyces cerevisiae


Alignment Length:348 Identity:163/348 - (46%)
Similarity:220/348 - (63%) Gaps:5/348 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NLTAVLHGIEDMRLEQRPIPEIADDE-VLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMIIGHES 68
            |...||..:.|:.:||||||.|.|.. |.||:.:.||||||:||...|.||.::|..||::||||
Yeast     6 NPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHES 70

  Fly    69 AGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPPYDGNLTRYYKHAA 133
            :|.|.::|..||.:|||||||||||||.|..|..|:|.|||||.|.|.||||.||.|.:||....
Yeast    71 SGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGSYNLCPHMAFAATPPIDGTLVKYYLSPE 135

  Fly   134 DFCFKLPDHVTMEEGALLEPLSVGVHACKRAEVTLGSKVLILGAGPIGLVTLMAAQAMGASEILI 198
            ||..|||:.|:.||||.:||||||||:.|.|.|..|:||::.||||:||:|...|:|.||::::.
Yeast   136 DFLVKLPEGVSYEEGACVEPLSVGVHSNKLAGVRFGTKVVVFGAGPVGLLTGAVARAFGATDVIF 200

  Fly   199 TDLVQQRLDVAKELGATHTLLLKRDQT--AEETAVLVQKTMGG-QPDKSIDCCGAESSARLAIFA 260
            .|:...:|..||:.|||:|....:..|  |::.|..|||.:|| ..|...:|.||:.....|:..
Yeast   201 VDVFDNKLQRAKDFGATNTFNSSQFSTDKAQDLADGVQKLLGGNHADVVFECSGADVCIDAAVKT 265

  Fly   261 TRSGGIVVVVGMGAAEIKLPLINALAREVDIRGVFRYC-NDYAAALALVASGKVNVKRLVTHHFD 324
            |:.||.:|.||||......|:.....:|:.:.|.|||. .||..|:.|||:||||||.|:||.|.
Yeast   266 TKVGGTMVQVGMGKNYTNFPIAEVSGKEMKLIGCFRYSFGDYRDAVNLVATGKVNVKPLITHKFK 330

  Fly   325 IKETAKAFETSRKGLGGAIKVMI 347
            .::.|||::.:....|..:|.:|
Yeast   331 FEDAAKAYDYNIAHGGEVVKTII 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-1NP_001287203.1 PLN02702 4..346 CDD:215378 162/345 (47%)
sorbitol_DH 8..349 CDD:176188 162/345 (47%)
SOR2NP_010035.1 sorbitol_DH 8..353 CDD:176188 161/344 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 143 1.000 Domainoid score I996
eggNOG 1 0.900 - - E1_COG1063
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56080
Inparanoid 1 1.050 305 1.000 Inparanoid score I487
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56613
OrthoFinder 1 1.000 - - FOG0001480
OrthoInspector 1 1.000 - - mtm9250
orthoMCL 1 0.900 - - OOG6_100349
Panther 1 1.100 - - O PTHR43161
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X751
TreeFam 1 0.960 - -
1312.830

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