DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-1 and AT5G51970

DIOPT Version :9

Sequence 1:NP_001287203.1 Gene:Sodh-1 / 40836 FlyBaseID:FBgn0024289 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_200010.1 Gene:AT5G51970 / 835272 AraportID:AT5G51970 Length:364 Species:Arabidopsis thaliana


Alignment Length:358 Identity:171/358 - (47%)
Similarity:234/358 - (65%) Gaps:20/358 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KDNLTAVLHGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMIIGHE 67
            ::|:.|.|.||..::::...:|.:...:|.:.|.:|||||||||||...|..|||:.:||:||||
plant    16 EENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHE 80

  Fly    68 SAGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPPYDGNLTRYYKHA 132
            .||::.::|::|..|.||||||:|||:.|.:|:.|::|:|||||.|.|.||||..|:|.....|.
plant    81 CAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRYNLCPEMKFFATPPVHGSLANQVVHP 145

  Fly   133 ADFCFKLPDHVTMEEGALLEPLSVGVHACKRAEVTLGSKVLILGAGPIGLVTLMAAQAMGASEIL 197
            ||.|||||::|::||||:.||||||||||:||||...:.||::|||||||||::||:|.....|:
plant   146 ADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVGPETNVLVMGAGPIGLVTMLAARAFSVPRIV 210

  Fly   198 ITDLVQQRLDVAKELGATHTLLLKRDQTAEETAVL---------VQKTMGGQPDKSIDCCGAESS 253
            |.|:.:.||.|||:|||        |:..:.|..|         :||.||...|.:.||.|...:
plant   211 IVDVDENRLAVAKQLGA--------DEIVQVTTNLEDVGSEVEQIQKAMGSNIDVTFDCAGFNKT 267

  Fly   254 ARLAIFATRSGGIVVVVGMGAAEIKLPLINALAREVDIRGVFRYCNDYAAALALVASGKVNVKRL 318
            ...|:.|||.||.|.:||||...:.:||..|.|||||:.|||||.|.:...|..:.|||::||.|
plant   268 MSTALAATRCGGKVCLVGMGHGIMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLTSGKIDVKPL 332

  Fly   319 VTHHFDI--KETAKAFETSRKGLGGAIKVMIHV 349
            :||.|..  ||...|||||.:| ..|||||.::
plant   333 ITHRFGFSQKEVEDAFETSARG-SNAIKVMFNL 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-1NP_001287203.1 PLN02702 4..346 CDD:215378 169/352 (48%)
sorbitol_DH 8..349 CDD:176188 170/351 (48%)
AT5G51970NP_200010.1 PLN02702 1..364 CDD:215378 171/356 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 136 1.000 Domainoid score I1596
eggNOG 1 0.900 - - E1_COG1063
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56080
Inparanoid 1 1.050 327 1.000 Inparanoid score I688
OMA 1 1.010 - - QHG56613
OrthoDB 1 1.010 - - D1019156at2759
OrthoFinder 1 1.000 - - FOG0001480
OrthoInspector 1 1.000 - - otm2896
orthoMCL 1 0.900 - - OOG6_100349
Panther 1 1.100 - - O PTHR43161
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X751
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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