DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-1 and Sodh-2

DIOPT Version :9

Sequence 1:NP_001287203.1 Gene:Sodh-1 / 40836 FlyBaseID:FBgn0024289 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_524311.1 Gene:Sodh-2 / 41313 FlyBaseID:FBgn0022359 Length:360 Species:Drosophila melanogaster


Alignment Length:360 Identity:325/360 - (90%)
Similarity:342/360 - (95%) Gaps:0/360 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKDNLTAVLHGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMIIG 65
            ||.||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MATDNLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMIIG 65

  Fly    66 HESAGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPPYDGNLTRYYK 130
            ||:|||||||||||||||||||||||||||||.|||||||:||||..||||||||||||||||||
  Fly    66 HEAAGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGNLTRYYK 130

  Fly   131 HAADFCFKLPDHVTMEEGALLEPLSVGVHACKRAEVTLGSKVLILGAGPIGLVTLMAAQAMGASE 195
            |||||||||||||:|||||||||||||||||:||.|.||||||||||||||||||:|||||||||
  Fly   131 HAADFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVTLLAAQAMGASE 195

  Fly   196 ILITDLVQQRLDVAKELGATHTLLLKRDQTAEETAVLVQKTMGGQPDKSIDCCGAESSARLAIFA 260
            |||||||||||||||||||||||||:|||:||||..:|.:||...||||||||||||||||||||
  Fly   196 ILITDLVQQRLDVAKELGATHTLLLQRDQSAEETVKVVHQTMSEVPDKSIDCCGAESSARLAIFA 260

  Fly   261 TRSGGIVVVVGMGAAEIKLPLINALAREVDIRGVFRYCNDYAAALALVASGKVNVKRLVTHHFDI 325
            |||||:||||||||.|:|||||||||||:||||||||||||:||||||||||||||||||||:||
  Fly   261 TRSGGVVVVVGMGAPEVKLPLINALAREIDIRGVFRYCNDYSAALALVASGKVNVKRLVTHHYDI 325

  Fly   326 KETAKAFETSRKGLGGAIKVMIHVQPRDTNNPRKF 360
            .|||:||||||:|.||||||||||||||.||..||
  Fly   326 TETAEAFETSRRGTGGAIKVMIHVQPRDANNKVKF 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-1NP_001287203.1 PLN02702 4..346 CDD:215378 310/341 (91%)
sorbitol_DH 8..349 CDD:176188 309/340 (91%)
Sodh-2NP_524311.1 PLN02702 4..346 CDD:215378 310/341 (91%)
sorbitol_DH 8..349 CDD:176188 309/340 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445286
Domainoid 1 1.000 136 1.000 Domainoid score I1596
eggNOG 1 0.900 - - E1_COG1063
Homologene 1 1.000 - - H56080
Inparanoid 1 1.050 327 1.000 Inparanoid score I688
Isobase 1 0.950 - 0 Normalized mean entropy S593
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1019156at2759
OrthoFinder 1 1.000 - - FOG0001480
OrthoInspector 1 1.000 - - otm25520
orthoMCL 1 0.900 - - OOG6_100349
Panther 1 1.100 - - P PTHR43161
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R311
SonicParanoid 1 1.000 - - X751
1413.780

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