DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-1 and tms1

DIOPT Version :9

Sequence 1:NP_001287203.1 Gene:Sodh-1 / 40836 FlyBaseID:FBgn0024289 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_595120.1 Gene:tms1 / 2540119 PomBaseID:SPBC1773.05c Length:360 Species:Schizosaccharomyces pombe


Alignment Length:357 Identity:155/357 - (43%)
Similarity:217/357 - (60%) Gaps:12/357 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKDNLTAVLHGIEDMRLEQRPIPEIADD-EVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMII 64
            ||......||....|..:|.||...:.|| :|.:|:.:.|||||||||...|.||||:|.||||:
pombe     1 MAPAEKAFVLRKKMDTAIEDRPGQTLTDDHQVKVAIKATGICGSDVHYWKEGGIGDFILKKPMIL 65

  Fly    65 GHESAGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPPYDGNLTRYY 129
            ||||||||.::||.|::||.||.||:|||..||.||:|:.|:|||||.|.|.|||||||.|..||
pombe    66 GHESAGVVVEVGKGVSSLKPGDPVAVEPGCVCRLCDYCRSGRYNLCPHMEFAATPPYDGTLRTYY 130

  Fly   130 KHAADFCFKLPDHVTMEEGALLEPLSVGVHACKRAEVTLGSKVLILGAGPIGLVTLMAAQAMGAS 194
            ....|||.|||..:::|||||.||:||.|||..|..:..||:||::|.|.:||:.:..|:|.||.
pombe   131 ITTEDFCTKLPKQISVEEGALFEPMSVAVHAMTRGNLKCGSRVLVMGCGTVGLLMMAVAKAYGAI 195

  Fly   195 EILITDLVQQRLDVA-KELGAT--HTLLLKRDQTAEETA-----VLVQKTMGGQPDKSIDCCGAE 251
            :|:..|....|::.| |.:||.  ..:..|.:::..:.|     .:::|.  |:.|.::|..|..
pombe   196 DIVAVDASPSRVEFAQKYVGAKPFTPIAAKENESLPDYAQRYKQAIIEKY--GEFDFAVDATGVG 258

  Fly   252 SSARLAIFATRSGGIVVVVGMGAAEIKLPLINALAREVDIRGVFRYCND-YAAALALVASGKVNV 315
            .....|:.|.:.||..|..|.|...|..|:.:.:..|:::.|.|||.:. |..:|.||::|.|:|
pombe   259 ICIHTAVLALKRGGTFVQAGNGKPVIDFPINHIINYEINVLGSFRYAHGCYKQSLFLVSNGLVDV 323

  Fly   316 KRLVTHHFDIKETAKAFETSRKGLGGAIKVMI 347
            |.|:||.|..|:..||:||...|..|.:||:|
pombe   324 KPLITHRFAFKDALKAYETVASGEEGVLKVII 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-1NP_001287203.1 PLN02702 4..346 CDD:215378 151/351 (43%)
sorbitol_DH 8..349 CDD:176188 153/350 (44%)
tms1NP_595120.1 sorbitol_DH 7..355 CDD:176188 152/349 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 151 1.000 Domainoid score I1090
eggNOG 1 0.900 - - E1_COG1063
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56080
Inparanoid 1 1.050 282 1.000 Inparanoid score I663
OMA 1 1.010 - - QHG56613
OrthoFinder 1 1.000 - - FOG0001480
OrthoInspector 1 1.000 - - otm47364
orthoMCL 1 0.900 - - OOG6_100349
Panther 1 1.100 - - O PTHR43161
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R311
SonicParanoid 1 1.000 - - X751
TreeFam 1 0.960 - -
1413.860

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