DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-1 and Sord

DIOPT Version :9

Sequence 1:NP_001287203.1 Gene:Sodh-1 / 40836 FlyBaseID:FBgn0024289 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_666238.1 Gene:Sord / 20322 MGIID:98266 Length:357 Species:Mus musculus


Alignment Length:352 Identity:202/352 - (57%)
Similarity:271/352 - (76%) Gaps:3/352 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DNLTAVLHGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMIIGHES 68
            :||:.|:||..|:|||..||||:..::|||.|.|||||||||||..||||||||:.|||::|||:
Mouse     8 ENLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVLGHEA 72

  Fly    69 AGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPPYDGNLTRYYKHAA 133
            ||.|.|:|:.|..||.|||||||||||....::||.|:|||.|.:.||||||.||||.|:|||.|
Mouse    73 AGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPDDGNLCRFYKHNA 137

  Fly   134 DFCFKLPDHVTMEEGALLEPLSVGVHACKRAEVTLGSKVLILGAGPIGLVTLMAAQAMGASEILI 198
            |||:||||.||.|||||:||||||::||:|..|:||:|||:.||||:|:|||:.|:||||:::::
Mouse   138 DFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVTLLVAKAMGAAQVVV 202

  Fly   199 TDLVQQRLDVAKELGATHTLLLKRDQTAEETAVLVQKTMGGQPDKSIDCCGAESSARLAIFATRS 263
            |||...||..|||:||..|:.:.: :|.:|.|..|:..:|.:|:.:|:|.|||||.:..|:||.|
Mouse   203 TDLSASRLTKAKEVGADFTIQVGK-ETPQEIASKVESLLGSKPEVTIECTGAESSVQTGIYATHS 266

  Fly   264 GGIVVVVGMGAAEIKLPLINALAREVDIRGVFRYCNDYAAALALVASGKVNVKRLVTHHFDIKET 328
            ||.:|:|||||..:.|||::|..|||||:|||||||.:..|::::||..:|||.||||.|.:::.
Mouse   267 GGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRYCNTWPMAISMLASKTLNVKPLVTHRFPLEKA 331

  Fly   329 AKAFETSRKGLGGAIKVMIHVQPRDTN 355
            .:||||::||:|  :||||...|.|.|
Mouse   332 VEAFETAKKGVG--LKVMIKCDPNDQN 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-1NP_001287203.1 PLN02702 4..346 CDD:215378 196/341 (57%)
sorbitol_DH 8..349 CDD:176188 197/340 (58%)
SordNP_666238.1 sorbitol_DH 11..350 CDD:176188 197/341 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834937
Domainoid 1 1.000 161 1.000 Domainoid score I3996
eggNOG 1 0.900 - - E1_COG1063
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56080
Inparanoid 1 1.050 420 1.000 Inparanoid score I1777
Isobase 1 0.950 - 0 Normalized mean entropy S593
OMA 1 1.010 - - QHG56613
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001480
OrthoInspector 1 1.000 - - otm43959
orthoMCL 1 0.900 - - OOG6_100349
Panther 1 1.100 - - O PTHR43161
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R311
SonicParanoid 1 1.000 - - X751
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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