DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sodh-1 and D2063.1

DIOPT Version :9

Sequence 1:NP_001287203.1 Gene:Sodh-1 / 40836 FlyBaseID:FBgn0024289 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001317740.1 Gene:D2063.1 / 183957 WormBaseID:WBGene00017060 Length:350 Species:Caenorhabditis elegans


Alignment Length:324 Identity:98/324 - (30%)
Similarity:145/324 - (44%) Gaps:27/324 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDF--VLTKPMIIGHESAGVVAKLGKK 78
            :.::|.|||:..:||:|:.|:..|||.||||..    :|||  |...|||.|||.||.|..:|.|
 Worm    22 LEIKQLPIPQPNEDELLVKMEYSGICHSDVHTW----LGDFHYVSKCPMIGGHEGAGSVISVGSK 82

  Fly    79 VTTLKVGDRVAIE--PGVPCRKCDHCKQGKYNLCPGMVFCATPPYDGNLTRYYKHAADFCFKLPD 141
            |...::||:|.|:  .| .|..|::|:.|...|||.:.......| |....|.........|:|.
 Worm    83 VKNWQIGDKVGIKLVQG-NCLNCEYCQTGHEPLCPHVWNIGVQKY-GTFQEYATIRDVDAIKIPK 145

  Fly   142 HVTMEEGALLEPLSVG----VHACKRAEVTLGSKVLILGA-GPIGLVTLMAAQAMGASEILITDL 201
            .:.|...|   |:..|    ..|.|.:||..|..|.:.|| |.:|...:..|:|||...:.|...
 Worm   146 SMNMAAAA---PVLCGGVTAYKALKESEVKSGQIVAVTGAGGGLGSFAIQYARAMGMRVVAIDHP 207

  Fly   202 VQQRLDVAKELGATHTLLLKRDQTAEETAVL-VQKTMGGQPDKSIDCCGAESSARLAIFATRSGG 265
            .::.  ..|.|||...:    |....|..|. :::...|.....::...|:.....|:...|..|
 Worm   208 SKEA--HCKSLGAEWFV----DAFGTEDIVAHIREITDGGAHGVVNFAAAKVPMEKALEYVRKRG 266

  Fly   266 IVVVVGMGA-AEIKLPLINALAREVDIRG-VFRYCNDYAAALALVASGKVNVKRLVTHHFDIKE 327
            .||.||:.. ::|.:..|..:...|.|:| :.....|...|:..||.|.|||...:....|:.|
 Worm   267 TVVFVGLAKDSKILVDTIPLIFNAVKIKGSIVGSRLDVNEAMDFVARGAVNVPLELVKLEDVAE 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sodh-1NP_001287203.1 PLN02702 4..346 CDD:215378 98/324 (30%)
sorbitol_DH 8..349 CDD:176188 98/324 (30%)
D2063.1NP_001317740.1 CAD3 10..348 CDD:176257 98/324 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S593
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D605481at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.870

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