DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and Barhl2

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_075245.1 Gene:Barhl2 / 65050 RGDID:620726 Length:384 Species:Rattus norvegicus


Alignment Length:293 Identity:65/293 - (22%)
Similarity:101/293 - (34%) Gaps:92/293 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 SPSSQVGGVM----PQAQTNGQLGVPQQQQQ----QQQQPSQNQQQQQAQQAPQQLQQQLPQVTQ 144
            :|||.:...:    |...|:|    ||....    ||..|......|..|.:||  ||..||   
  Rat    62 APSSPISVTLEPPEPHLVTDG----PQHHHHLHHGQQPPPPSAPPAQSLQPSPQ--QQPPPQ--- 117

  Fly   145 QVTHPQQQQQQPVVYASCKLQAAVGGLGMVPE------------GGSPPLVDQMSGHHMNAQMTL 197
                ||...||            :|.....|.            |.|.||.              
  Rat   118 ----PQSAAQQ------------LGSAAAAPRTSTSSFLIKDILGDSKPLA-------------- 152

  Fly   198 PHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHP 262
                           ...|..|.|...||..   :|:.........|:  :.|.....::.:...
  Rat   153 ---------------ACAPYSTSVSSPHHTP---KQECNAAHESFRPK--LEQEDSKTKLDKRED 197

  Fly   263 GQ-----HTPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYL 322
            .|     |....:.....:|...||..        :.::.::.|..::.:|..:||:.|...:||
  Rat   198 SQSDIKCHGTKEEGDREITSSRESPPV--------RAKKPRKARTAFSDHQLNQLERSFERQKYL 254

  Fly   323 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 355
            :.:.|:::|.||.||:.|:|.|:||||.|||::
  Rat   255 SVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQ 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 20/161 (12%)
Homeodomain 298..354 CDD:459649 22/55 (40%)
Barhl2NP_075245.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..134 25/96 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..237 14/95 (15%)
Homeodomain 230..286 CDD:459649 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..384
Blue background indicates that the domain is not in the aligned region.

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