DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and Vax1

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_072158.1 Gene:Vax1 / 64571 RGDID:621132 Length:336 Species:Rattus norvegicus


Alignment Length:94 Identity:34/94 - (36%)
Similarity:46/94 - (48%) Gaps:14/94 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEP 362
            ||.|.::|..|...||.||...:|:..|.|.|:|..|.|:|.|:|:||||||.|.||:.....|.
  Rat   101 KRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQGKDSEL 165

  Fly   363 GSG--------------GEGDEITPPNSP 377
            .|.              .:|..::||..|
  Rat   166 RSVVSETAATCSVLRLLEQGRLLSPPGLP 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 3/7 (43%)
Homeodomain 298..354 CDD:459649 26/55 (47%)
Vax1NP_072158.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..69
vax upstream domain 72..99
homeobox 100..159 28/57 (49%)
Homeodomain 101..157 CDD:459649 26/55 (47%)
vax downstream domain 178..189 1/10 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..267
vax terminal domain 315..323
Blue background indicates that the domain is not in the aligned region.

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