DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and ceh-63

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001123094.1 Gene:ceh-63 / 6418830 WormBaseID:WBGene00045215 Length:152 Species:Caenorhabditis elegans


Alignment Length:117 Identity:39/117 - (33%)
Similarity:51/117 - (43%) Gaps:14/117 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 NSQSSGMPSPLYPWMRSQFG-----------KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 326
            |..|:......:||......           |...|...|.|:|..|...||.||..|.|:.:.|
 Worm     6 NMTSNKFAYDFFPWSNDTNSSQQIKNIKPPPKRSNRPTKRTTFTSEQVTLLELEFAKNEYICKDR 70

  Fly   327 RIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 378
            |.|:|..:.|||.|:|.||||||.| |:...:........:.||.:|  |||
 Worm    71 RGELAQTIELTECQVKTWFQNRRTK-KRRCTSPLRKSMMKKSDERSP--SPQ 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 8/43 (19%)
Homeodomain 298..354 CDD:459649 26/55 (47%)
ceh-63NP_001123094.1 Homeodomain 44..98 CDD:459649 27/54 (50%)

Return to query results.
Submit another query.