DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and ceh-63

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001123094.1 Gene:ceh-63 / 6418830 WormBaseID:WBGene00045215 Length:152 Species:Caenorhabditis elegans


Alignment Length:117 Identity:39/117 - (33%)
Similarity:51/117 - (43%) Gaps:14/117 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 NSQSSGMPSPLYPWMRSQFG-----------KCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRR 326
            |..|:......:||......           |...|...|.|:|..|...||.||..|.|:.:.|
 Worm     6 NMTSNKFAYDFFPWSNDTNSSQQIKNIKPPPKRSNRPTKRTTFTSEQVTLLELEFAKNEYICKDR 70

  Fly   327 RIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGGEGDEITPPNSPQ 378
            |.|:|..:.|||.|:|.||||||.| |:...:........:.||.:|  |||
 Worm    71 RGELAQTIELTECQVKTWFQNRRTK-KRRCTSPLRKSMMKKSDERSP--SPQ 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 8/43 (19%)
Homeobox 301..354 CDD:395001 26/52 (50%)
ceh-63NP_001123094.1 Homeobox 44..98 CDD:365835 27/54 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

Return to query results.
Submit another query.