DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxa5a

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_073787191.1 Gene:hoxa5a / 58055 ZFINID:ZDB-GENE-000823-9 Length:265 Species:Danio rerio


Alignment Length:372 Identity:111/372 - (29%)
Similarity:144/372 - (38%) Gaps:127/372 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MTSYFTNSYMGADMHHGHYPGNGVTDLDAQQMHHYSQNANHQGNMPYPRFPPYDRMPYYNGQ--- 72
            |:|||.||:.      |.|| |||.    ..:|:|..: |..|..       .|....::|:   
Zfish     1 MSSYFVNSFC------GRYP-NGVD----YPLHNYGDH-NSSGQC-------RDSTGMHSGRYAC 46

  Fly    73 ---GMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQQAPQQ 134
               |||....|      .||...:                          |..::.|..:.:|  
Zfish    47 GYNGMDLSTGH------SSPGHFL--------------------------SSGERTQSYKDSP-- 77

  Fly   135 LQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPH 199
                        |....:..|||..:|.                      :.|..|:        
Zfish    78 ------------TATPVRYNQPVTASSA----------------------EPSSDHL-------- 100

  Fly   200 HMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQ 264
                |.:.|..:.|.       .|:|..:.:  ..|......:...|.:...:|..::......:
Zfish   101 ----PCSSLANSPVS-------EQSHRALKI--SLSSTAGSASKSFGTVLSREGVSKVSSSMEEE 152

  Fly   265 HTPPSQNPNSQSSGMPSPLYPWMR-------SQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYL 322
            ..|.|....||:......:|||||       :..|  .|.||.|..|||||||||||||||||||
Zfish   153 KPPGSGQTASQNVSEAPQIYPWMRKLHISHDNLAG--PEGKRPRTAYTRYQTLELEKEFHFNRYL 215

  Fly   323 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK----GEPGSG 365
            ||||||||||.|||:|||||||||||||||||:||.|    ...|||
Zfish   216 TRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDNKLKSMNMAAAGSG 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 26/151 (17%)
Homeodomain 298..354 CDD:459649 50/55 (91%)
hoxa5aXP_073787191.1 None

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