DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and hoxb5b

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571612.2 Gene:hoxb5b / 58052 ZFINID:ZDB-GENE-000823-6 Length:276 Species:Danio rerio


Alignment Length:363 Identity:114/363 - (31%)
Similarity:144/363 - (39%) Gaps:114/363 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MTSYFTNSYM-----GADMHHGHYPGNGVTDLDAQQMHHYSQNANHQGNMPYPRFPPYDRMPYYN 70
            |:|||.||:.     |:|....:|..||     |....:....:.|.|:..|          .||
Zfish     1 MSSYFLNSFSGRYPNGSDYQLLNYGTNG-----AMNASYRDSTSMHSGSFGY----------NYN 50

  Fly    71 GQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQ---QAP 132
            |..:.       .:||:               ||..|......:..|.|||..:.:|:.   .:|
Zfish    51 GIDLS-------VNRPN---------------NGHFGAVGDNSRAFQNPSQETRYRQSSCSLSSP 93

  Fly   133 QQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTL 197
            ..|                         ||   |....|.:  :|.|||  ...|....|:::|.
Zfish    94 DPL-------------------------SC---ATSDTLEL--KGSSPP--SDQSTPTGNSRLTN 126

  Fly   198 PHHM-GHPQAQLGYTD-VGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQG 260
            .::: .........|| ..|...||...........|:|..|......|    :.||.|      
Zfish   127 SNNLTSSNSTHFADTDETNVSSETEEGAQTTTTSRTQKQESVATSTTTP----NDGQTP------ 181

  Fly   261 HPGQHTPPSQNPNSQSSGMPSPLYPWMR----SQFGKCQERKRGRQTYTRYQTLELEKEFHFNRY 321
                                 .::||||    |......:.||.|..||||||||||||||||||
Zfish   182 ---------------------QIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRY 225

  Fly   322 LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 359
            |||||||||||||||:|||||||||||||||||:||.|
Zfish   226 LTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 32/150 (21%)
Homeobox 301..354 CDD:395001 49/52 (94%)
hoxb5bNP_571612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..182 31/181 (17%)
Antp-type hexapeptide 183..188 2/4 (50%)
Homeobox 205..257 CDD:278475 48/51 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.910

Return to query results.
Submit another query.