DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxb5b

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571612.2 Gene:hoxb5b / 58052 ZFINID:ZDB-GENE-000823-6 Length:276 Species:Danio rerio


Alignment Length:363 Identity:114/363 - (31%)
Similarity:144/363 - (39%) Gaps:114/363 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MTSYFTNSYM-----GADMHHGHYPGNGVTDLDAQQMHHYSQNANHQGNMPYPRFPPYDRMPYYN 70
            |:|||.||:.     |:|....:|..||     |....:....:.|.|:..|          .||
Zfish     1 MSSYFLNSFSGRYPNGSDYQLLNYGTNG-----AMNASYRDSTSMHSGSFGY----------NYN 50

  Fly    71 GQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQ---QAP 132
            |..:.       .:||:               ||..|......:..|.|||..:.:|:.   .:|
Zfish    51 GIDLS-------VNRPN---------------NGHFGAVGDNSRAFQNPSQETRYRQSSCSLSSP 93

  Fly   133 QQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTL 197
            ..|                         ||   |....|.:  :|.|||  ...|....|:::|.
Zfish    94 DPL-------------------------SC---ATSDTLEL--KGSSPP--SDQSTPTGNSRLTN 126

  Fly   198 PHHM-GHPQAQLGYTD-VGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQG 260
            .::: .........|| ..|...||...........|:|..|......|    :.||.|      
Zfish   127 SNNLTSSNSTHFADTDETNVSSETEEGAQTTTTSRTQKQESVATSTTTP----NDGQTP------ 181

  Fly   261 HPGQHTPPSQNPNSQSSGMPSPLYPWMR----SQFGKCQERKRGRQTYTRYQTLELEKEFHFNRY 321
                                 .::||||    |......:.||.|..||||||||||||||||||
Zfish   182 ---------------------QIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRY 225

  Fly   322 LTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 359
            |||||||||||||||:|||||||||||||||||:||.|
Zfish   226 LTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 32/150 (21%)
Homeodomain 298..354 CDD:459649 51/55 (93%)
hoxb5bNP_571612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..182 31/181 (17%)
Antp-type hexapeptide 183..188 2/4 (50%)
Homeodomain 202..258 CDD:459649 51/55 (93%)

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