DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxa1a

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571611.1 Gene:hoxa1a / 58051 ZFINID:ZDB-GENE-000823-5 Length:329 Species:Danio rerio


Alignment Length:280 Identity:90/280 - (32%)
Similarity:112/280 - (40%) Gaps:56/280 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 NQQQQQA--QQAPQQLQQQLPQVTQQVTHPQQQQQQPVV-YASCKLQAAVGGLGMVPEGGSPPLV 183
            |.|.|||  .|:|..|     .:|.. .||....|.... |....|...|......|:.|  |||
Zfish    64 NSQPQQAGSYQSPGTL-----SITYS-AHPSYGTQSFCTGYNHYALNQDVESSVSFPQCG--PLV 120

  Fly   184 DQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMM 248
              .||   |...|:..|..|   :.||:.          .|.|..|.:|..|......:....:.
Zfish   121 --YSG---NISSTVVQHRHH---RHGYSS----------GNVHLHGQFQYGSATYGNSSDQANLT 167

  Fly   249 H-QGQGPP--QMHQGHPGQHTPPSQNPNSQSSGMPS-PLYPWMR-----SQFGKCQERKRG---- 300
            . .|...|  .:|..|......|      .|.|:|: ..:.||:     .:.||..|...|    
Zfish   168 FVAGCSNPLSPLHVPHHDACCSP------LSDGVPTGQTFDWMKVKRNPPKTGKAGEYGFGGQPN 226

  Fly   301 --RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN------K 357
              |..::..|..|||||||||:||||.||:|||.:|.|.|.|:||||||||||.||..      |
Zfish   227 TVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLLPK 291

  Fly   358 TKGEPGSGGEGDEITPPNSP 377
            :..|...|.|..|.....||
Zfish   292 SLSEQKDGLEKTEDASEKSP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 35/159 (22%)
Homeobox 301..354 CDD:395001 34/52 (65%)
hoxa1aNP_571611.1 Antp-type hexapeptide 200..205 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 208..227 4/18 (22%)
Homeobox 229..281 CDD:278475 34/51 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 277..329 12/35 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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