DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxa3a

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571609.1 Gene:hoxa3a / 58049 ZFINID:ZDB-GENE-000823-3 Length:411 Species:Danio rerio


Alignment Length:316 Identity:87/316 - (27%)
Similarity:117/316 - (37%) Gaps:126/316 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 MPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYAS 161
            :|....|| ||....|||.                            .|..|.:.:..:|    :
Zfish    16 LPYQSANG-LGYDASQQQY----------------------------LQALHAESEYHRP----A 47

  Fly   162 CKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHH 226
            |.||             ||.:   .:|.|.:      :.|.....|:..|...|.|.::..|   
Zfish    48 CSLQ-------------SPGI---SAGLHTS------NEMSEVCQQINGTQATVTDTSDNKQ--- 87

  Fly   227 NMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSG------MPSP--- 282
                       ||..  |.|               |...:..:|.||..|:.      .|:|   
Zfish    88 -----------PPTA--PSG---------------PSSPSSLNQIPNIDSAAKNPVHVSPTPSTR 124

  Fly   283 --LYPWMRSQFGKCQER-----------------------KRGRQTYTRYQTLELEKEFHFNRYL 322
              ::|||:......:::                       ||.|..||..|.:||||||||||||
Zfish   125 KHIFPWMKESRQNTKQKSCSIISVESCAGRQKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYL 189

  Fly   323 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG-EPGSGGEGDEITPPNSP 377
            .|.||:|:|:.|.||||||||||||||||:||:.|..| .|..|.:.     |:||
Zfish   190 CRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGLGMMPSPGAQS-----PHSP 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 31/178 (17%)
Homeobox 301..354 CDD:395001 38/52 (73%)
hoxa3aNP_571609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..126 14/77 (18%)
Antp-type hexapeptide 127..132 2/4 (50%)
Homeobox 168..220 CDD:278475 38/51 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 223..250 7/23 (30%)
DUF4074 347..409 CDD:290032
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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