DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxa9a

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_571607.2 Gene:hoxa9a / 58047 ZFINID:ZDB-GENE-000823-1 Length:250 Species:Danio rerio


Alignment Length:246 Identity:72/246 - (29%)
Similarity:96/246 - (39%) Gaps:71/246 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 QQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPD 217
            |.:|.:     |.|.:..||........|:.......|      :|.|.          ..|||.
Zfish    33 QHRPTI-----LPADLSDLGPCTFPAKQPVYGTSDWGH------IPTHF----------STGVPS 76

  Fly   218 VTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSS----- 277
            |.:.|.....:|.|.|...:......||      ..||.::..|....|..:.:..::.|     
Zfish    77 VYQPHAQPPVVGDYVQSWLLDSACGLPQ------TEPPTVNHNHAKSDTNETNDDGTEYSPHTIL 135

  Fly   278 -----------------------------GMP-----SPLYPWMRSQFGKCQERKRGRQTYTRYQ 308
                                         |.|     :|:..|:.:.    ..||: |..||::|
Zfish   136 QPEVFTNGGCSTKTEAESSRTAEKSGDIEGKPGADPENPVSNWLHAS----STRKK-RCPYTKHQ 195

  Fly   309 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 359
            .|||||||.||.||||.||.|:|..|.|||||:||||||||||.||.||.:
Zfish   196 ILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKFNKNE 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 31/183 (17%)
Homeodomain 298..354 CDD:459649 38/55 (69%)
hoxa9aNP_571607.2 Hox9_act 1..171 CDD:461369 27/164 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 105..177 8/71 (11%)
Homeodomain 185..241 CDD:459649 39/56 (70%)

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