DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and bsx

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_999892.1 Gene:bsx / 573364 ZFINID:ZDB-GENE-040628-4 Length:227 Species:Danio rerio


Alignment Length:133 Identity:48/133 - (36%)
Similarity:65/133 - (48%) Gaps:22/133 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 PQMHQGHPGQHTP------------PSQNPNSQSSGMPSP-LYPWMRSQFGKCQERKRGRQTYTR 306
            |.:..|:|...||            |..:|...:|||..| |:.......||...|::.|..::.
Zfish    50 PLLEYGYPLMPTPILAPHPHHPLHKPEHHPYFFTSGMQMPALFQHHPELPGKHCRRRKARTVFSD 114

  Fly   307 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE-NKTKGEPGSGGEGDE 370
            .|...|||.|...|||:...|:|:|.||.|:|.|:|.||||||||.||: .||        :.|:
Zfish   115 SQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQLRKT--------QDDQ 171

  Fly   371 ITP 373
            .||
Zfish   172 KTP 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 16/63 (25%)
Homeodomain 298..354 CDD:459649 26/55 (47%)
bsxNP_999892.1 Homeodomain 106..162 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..227 10/26 (38%)

Return to query results.
Submit another query.