DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and alx1

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001038539.1 Gene:alx1 / 565176 ZFINID:ZDB-GENE-050419-191 Length:320 Species:Danio rerio


Alignment Length:71 Identity:27/71 - (38%)
Similarity:39/71 - (54%) Gaps:6/71 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 KC------QERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 351
            ||      .:::|.|.|:|..|..||||.|....|.....|.::|....|||.::::||||||.|
Zfish   110 KCDSNVSSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQVWFQNRRAK 174

  Fly   352 WKKENK 357
            |:|..:
Zfish   175 WRKRER 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 5/18 (28%)
Homeodomain 298..354 CDD:459649 24/55 (44%)
alx1NP_001038539.1 Homeodomain 121..177 CDD:459649 24/55 (44%)
Transactivation domain. /evidence=ECO:0000250|UniProtKB:Q63087 180..320 0/1 (0%)
OAR 296..314 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 300..313
Blue background indicates that the domain is not in the aligned region.

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