Protein Alignment Antp and hoxc12a

DIOPT Version :10

• Sequence 1: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001104229.1
• Gene: hoxc12a / 562600
• ZFINID: ZDB-GENE-000822-6
• Length: 274
• Species: Danio rerio
• Alignment Length: 155
• Identity: 50/155 - (32%)
• Similarity: 75/155 - (48%)
• Gaps: 31/155 - (20%)

  Fly   218 VTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQ------------MHQGHPGQHTPP-- 268
            |:..|..|:.||    .||.  ......|..|..|.||.            :::|.....:.|
Zfish   122 VSSDHGMHNGMG----NSGT--FSKYDYGTEHLTQDPPSCQSLESDSSSSVLNEGGKTSASDPQT 180

  Fly   269 --SQNPNSQ--SSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIE 329
              ||..::.  :.|..:|.||.      ..:.||: |:.|::.|..|||.||..|.::||:||.|
Zfish   181 LVSQGNHASNIAGGGGAPWYPM------HTRTRKK-RKPYSKLQLAELEGEFMLNEFITRQRRRE 238

  Fly   330 IAHALCLTERQIKIWFQNRRMKWKK 354
            ::..|.|:::|:||||||||||.|:
Zfish   239 LSDRLNLSDQQVKIWFQNRRMKKKR 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	24/105 (23%)
		Homeodomain	298..354	CDD:459649	28/55 (51%)
hoxc12a	NP_001104229.1	Homeodomain	207..263	CDD:459649	29/56 (52%)