DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and barhl1a

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001017712.3 Gene:barhl1a / 550407 ZFINID:ZDB-GENE-050417-212 Length:299 Species:Danio rerio


Alignment Length:80 Identity:28/80 - (35%)
Similarity:48/80 - (60%) Gaps:8/80 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 SSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 340
            ||...||        ..:.::.::.|..:|.:|..:||:.|...:||:.:.|:|:|.:|.||:.|
Zfish   142 SSSRDSP--------NSRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQ 198

  Fly   341 IKIWFQNRRMKWKKE 355
            :|.|:||||.|||::
Zfish   199 VKTWYQNRRTKWKRQ 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 5/29 (17%)
Homeodomain 298..354 CDD:459649 23/55 (42%)
barhl1aNP_001017712.3 None

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