DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and pitx2

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001017227.1 Gene:pitx2 / 549981 XenbaseID:XB-GENE-482492 Length:345 Species:Xenopus tropicalis


Alignment Length:197 Identity:51/197 - (25%)
Similarity:72/197 - (36%) Gaps:44/197 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 SGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGM---- 247
            |.||.:      ||..|.|                ||:||....:||.....|.......|    
 Frog    22 SSHHQH------HHQQHQQ----------------HQHHHQQHHHQQHQQPQPQAVTLVSMASSL 64

  Fly   248 -MHQGQGPPQMHQGHPGQHTPP-------SQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTY 304
             ...|:...::........:.|       |....::.|....|         .|.:.::|.|..:
 Frog    65 GQRSGECKARLEVHTISDTSSPEAADKDKSHQSKNEDSSTDDP---------SKKKRQRRQRTHF 120

  Fly   305 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKW-KKENKTKGEPGSGGEG 368
            |..|..|||..|..|||.....|.|||....|||.::::||:|||.|| |:|...:.|....|.|
 Frog   121 TSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFG 185

  Fly   369 DE 370
            .:
 Frog   186 PQ 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 23/130 (18%)
Homeodomain 298..354 CDD:459649 25/56 (45%)
pitx2NP_001017227.1 Homeodomain 114..170 CDD:459649 25/55 (45%)
OAR 303..320 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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