DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and pou3f1

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001016504.1 Gene:pou3f1 / 549258 XenbaseID:XB-GENE-853354 Length:375 Species:Xenopus tropicalis


Alignment Length:426 Identity:78/426 - (18%)
Similarity:122/426 - (28%) Gaps:185/426 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TNSYMGADMHHGHYPGNGVTDLDAQQMHH--YSQ----NANHQGNMPYPRFPPYDRMPYYNGQGM 74
            :|..|..|....|   .|.|..:.|:|.|  |.|    ||.|..::.:.::.|.....:.:|..:
 Frog    16 SNPLMHPDSDRMH---QGTTYREVQKMMHQEYLQGLATNAGHPMSLTHHQWLPNPASDWGSGSHL 77

  Fly    75 DQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQQAP------Q 133
            ..|.:|                       |:.||...::........::.....||.|      |
 Frog    78 GAQAEH-----------------------GKSGVQSSREDLSSSFHHHRSHLVHQQTPSSHAWAQ 119

  Fly   134 QLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLP 198
            .....||.::     |.....||::|:........|.||  |:..|                 |.
 Frog   120 SGGHHLPPMS-----PGSNSHQPLIYSQSSYTNLNGMLG--PQASS-----------------LH 160

  Fly   199 HHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPG 263
            |.|..|.    :.|.||.|.       |             |.:|||.:.|        ||.|..
 Frog   161 HSMRDPL----HDDPGVLDT-------H-------------VESPPQHLSH--------HQDHSD 193

  Fly   264 QHTPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKR----------------------GRQTYTR 306
            :..|.|.:                ..||.|..:::|                      .:.|..|
 Frog   194 EDAPSSDD----------------LEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICR 242

  Fly   307 YQTLE-----------------------------LEKEFHFNRYLTRRRRIEI------------ 330
            ::.|:                             |:|.....|...:|..||:            
 Frog   243 FEALQLSFKNMCKLKPLLNKWLEETDSTTGSPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLK 307

  Fly   331 ------------AHALCLTERQIKIWFQNRRMKWKK 354
                        |.:|.|.:..:::||.|||.|.|:
 Frog   308 CPKPSAHEITSLADSLQLEKEVVRVWFCNRRQKEKR 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 29/166 (17%)
Homeobox 301..354 CDD:395001 18/105 (17%)
pou3f1NP_001016504.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 4/15 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 56..139 16/110 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 151..200 22/99 (22%)
POU 194..268 CDD:197673 9/89 (10%)
Homeobox 289..343 CDD:365835 12/53 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3844
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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