DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxb4

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001116487.1 Gene:hoxb4 / 548393 XenbaseID:XB-GENE-1033882 Length:234 Species:Xenopus tropicalis


Alignment Length:320 Identity:94/320 - (29%)
Similarity:113/320 - (35%) Gaps:151/320 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 PRFPP------YDRMP------YYNGQGMDQQQQHQV-YSRPDSPSSQVGGVMPQAQTNGQLGVP 109
            |:|||      .|.:|      ||.||..:...||.. |||..|.||                  
 Frog    15 PKFPPCEEYSHTDYLPSGHSPEYYGGQKRESSFQHGAPYSRSLSSSS------------------ 61

  Fly   110 QQQQQQQQQPSQNQQQQQAQQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMV 174
                                 ||                          |.||:        |.|
 Frog    62 ---------------------AP--------------------------YTSCQ--------GSV 71

  Fly   175 PEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPP 239
            .:|...|   ..||       .||....|.::.:  |....|..:.:..:|.             
 Frog    72 RQGARLP---HSSG-------LLPGEKAHLESSI--TPTSPPSCSLIASDHK------------- 111

  Fly   240 VGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMR-------SQFGKCQER 297
                                 ||..   |.|:|         .:||||:       |......|.
 Frog   112 ---------------------HPDS---PGQDP---------VVYPWMKKAHISRASSTYSDGEA 143

  Fly   298 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 357
            ||.|..|||.|.||||||||:|||||||||:||||.|.|:|||||||||||||||||::|
 Frog   144 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWKKDHK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 29/151 (19%)
Homeobox 301..354 CDD:395001 43/52 (83%)
hoxb4NP_001116487.1 Homeobox 146..200 CDD:365835 43/53 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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