DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and Dbx2

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001418946.1 Gene:Dbx2 / 541457 RGDID:1359605 Length:377 Species:Rattus norvegicus


Alignment Length:295 Identity:69/295 - (23%)
Similarity:102/295 - (34%) Gaps:106/295 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 GGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLG-YTDV-------GVPDVTEVHQNH 225
            |.|...|...||.|..|      .|:..||..:.   ||.| |.||       |:|     ....
  Rat    43 GALSRSPRTRSPRLPGQ------RARTMLPSAVA---AQAGAYWDVVASSALLGLP-----APGF 93

  Fly   226 HNMG---MYQQ--QSGVPPVGAPPQGMMHQGQGPPQMHQ--GHP---------------GQHTPP 268
            .::|   :.:.  ::|..|..|||......|...||:..  .:|               ....||
  Rat    94 GSLGKSFLIENLLRAGAGPTHAPPSPRPAAGPECPQLRSLPANPVPLKLCPAGPFGARWAFQMPP 158

  Fly   269 SQNPNSQSSGM----PSPLYPWMRSQ--------FGKCQ------------------------ER 297
            .:.|..:.|..    |.|..|::.|.        .|.|:                        :.
  Rat   159 GRAPGERDSAFQPSAPVPSKPFLLSAGPFYSACCGGSCRRPASPTAFSREEHGLPLLTQDSNSKA 223

  Fly   298 KRG---RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 359
            :||   |..::..|...|||.|...:|:::..|.::|.:|.|.|.|:|||||||||||:...:.:
  Rat   224 RRGILRRAVFSEDQRKALEKMFQKQKYISKTDRRKLAISLGLKESQVKIWFQNRRMKWRNSKEKE 288

  Fly   360 -----------------GEPGSGGEGDEITPPNSP 377
                             .:|.:|      .||..|
  Rat   289 VLSNRCLQEVSLQEDRLAQPAAG------CPPQCP 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 41/205 (20%)
Homeodomain 298..354 CDD:459649 26/58 (45%)
Dbx2NP_001418946.1 PHA03247 <39..186 CDD:223021 36/156 (23%)
Homeodomain 229..283 CDD:459649 24/53 (45%)

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