DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and Emx1

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001414509.1 Gene:Emx1 / 500235 RGDID:1564002 Length:290 Species:Rattus norvegicus


Alignment Length:276 Identity:68/276 - (24%)
Similarity:100/276 - (36%) Gaps:82/276 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 QPVVYASCKLQAAV---GGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVP 216
            ||.......:::.|   ||.|..|..|.       :|.|       |..:...:..|..|.:..|
  Rat    36 QPATKRGFTIESLVAKDGGTGGSPGSGG-------AGSH-------PLAVAASEEPLRPTALNYP 86

  Fly   217 DVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQM----HQGHPGQHTPPS-------- 269
                    |.:.......||.|...|  .|......|.|::    ...||.....|:        
  Rat    87 --------HPSAAETAFVSGFPAAAA--AGASRSLYGGPELVFPEAMNHPALTVHPAHQLGSSSL 141

  Fly   270 QNPNSQSSGM---PSPLYPW-MRSQF------------------GK-CQERKRGRQTYTRYQTLE 311
            |.|:|..|..   |...||| :|::|                  |. .::.||.|..::..|.|.
  Rat   142 QPPHSFFSAQHRDPLHFYPWVLRNRFFGHRFQASEVPQDGLLLHGPFARKPKRIRTAFSPSQLLR 206

  Fly   312 LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK----------ENKTKGE----- 361
            ||:.|..|.|:....|.::|.:|.|:|.|:|:||||||.|:|:          |.|.||.     
  Rat   207 LERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQKKKGSHHINR 271

  Fly   362 -----PGSGGEGDEIT 372
                 ..:.||..::|
  Rat   272 WRIATKQANGEDIDVT 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 37/182 (20%)
Homeodomain 298..354 CDD:459649 24/55 (44%)
Emx1NP_001414509.1 None

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