DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and Dlx6

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001414318.1 Gene:Dlx6 / 500023 RGDID:1561539 Length:298 Species:Rattus norvegicus


Alignment Length:281 Identity:80/281 - (28%)
Similarity:105/281 - (37%) Gaps:57/281 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 QLGVPQQQQQQQQQPSQNQQQQQAQQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYAS-----CKL 164
            :.|..|||||||||..|.|||||.||.|.......||       |..||..|.:..:     |..
  Rat    23 EFGQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPQ-------PHSQQTSPAMAGAHYPLHCLH 80

  Fly   165 QAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMG 229
            .||.....    .||         ||.:.|   .||.|.|.|..|...          .||.::.
  Rat    81 SAAAAAAA----AGS---------HHHHHQ---HHHHGSPYASGGGNS----------YNHRSLA 119

  Fly   230 MYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQF-GK 293
            .|.              .|...|..|.:...|  ..:..:|.....:....:.:......:| ||
  Rat   120 AYP--------------YMSHSQHSPYLQSYH--NSSAAAQTRGDDTDQQKTTVIENGEIRFNGK 168

  Fly   294 CQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKT 358
            .::.::.|..|:..|...|...|...:||....|.|:|.:|.||:.|:||||||:|.|:||..|.
  Rat   169 GKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLLKQ 233

  Fly   359 KGEPGSGG--EGDEITPPNSP 377
            ...|....  .|.....|.||
  Rat   234 GSNPHESDPLPGSAALSPRSP 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 27/150 (18%)
Homeodomain 298..354 CDD:459649 22/55 (40%)
Dlx6NP_001414318.1 None

Return to query results.
Submit another query.