DRSC/TRiP Functional Genomics Resources

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Protein Alignment Antp and hoxa5

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001011405.1 Gene:hoxa5 / 496880 XenbaseID:XB-GENE-486061 Length:274 Species:Xenopus tropicalis


Alignment Length:374 Identity:115/374 - (30%)
Similarity:138/374 - (36%) Gaps:138/374 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MTSYFTNSYMGADMHHGHYPGNGVTDLDAQQMHHYSQNAN-----------HQGNMPYPRFPPYD 64
            |:|||.||:.      |.|| ||    ...|:|:|..:::           |.....|.      
 Frog     1 MSSYFVNSFC------GRYP-NG----PDYQLHNYGDHSSVNEQYRDTTSMHSSRYGYG------ 48

  Fly    65 RMPYYNGQGMD---QQQQH-----QVYSRPDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQ 121
                |||..:.   ....|     :..:.|.:|||..                        :|..
 Frog    49 ----YNGMDLSVGRSASNHFSANDRARNYPSNPSSST------------------------EPRY 85

  Fly   122 NQQQQQAQQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQM 186
            ||....|...|   ...|| .|...|.|.....|             ||...:            
 Frog    86 NQPAASAHSPP---PDPLP-CTAVATSPVSDSHQ-------------GGKNSI------------ 121

  Fly   187 SGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQG 251
                .|:..|..:...        :..|    |..|.|...:|   ..||.            :.
 Frog   122 ----TNSNNTTSNSSN--------SSTG----TSTHINRDGLG---ASSGA------------ED 155

  Fly   252 QGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMR------SQFGKCQERKRGRQTYTRYQTL 310
            ..|....|.       .|||..|.:..:...:|||||      ...|. .|.||.|..|||||||
 Frog   156 DAPASSDQA-------SSQNSQSPAPSVQPQIYPWMRKLHISHDNIGG-PEGKRARTAYTRYQTL 212

  Fly   311 ELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 359
            ||||||||||||||||||||||||||:|||||||||||||||||:||.|
 Frog   213 ELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 28/150 (19%)
Homeodomain 298..354 CDD:459649 51/55 (93%)
hoxa5NP_001011405.1 Homeodomain 200..256 CDD:459649 51/55 (93%)

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