DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and gsx1

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001012251.1 Gene:gsx1 / 449875 ZFINID:ZDB-GENE-041008-135 Length:243 Species:Danio rerio


Alignment Length:152 Identity:55/152 - (36%)
Similarity:74/152 - (48%) Gaps:29/152 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 GPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYP----------WMRSQFGKCQERKRGRQTYTRY 307
            |....|.....||:..|....:..||:....||          .:.:...:.|..||.|..:|..
Zfish    82 GTQYCHSALSRQHSTSSGVNLNSGSGLYQAAYPVPDPRQFHCISIENSSSQLQSSKRMRTAFTST 146

  Fly   308 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPGSGG------ 366
            |.||||:||..|.||:|.||||||..|.|:|:|:||||||||:|.|||.|: |...:|.      
Zfish   147 QLLELEREFTSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKS-GSHRTGAHNCKCS 210

  Fly   367 ----------EGDEI--TPPNS 376
                      |.|::  :||:|
Zfish   211 SSLSSARCSEEEDDLPMSPPSS 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 13/62 (21%)
Homeobox 301..354 CDD:395001 32/52 (62%)
gsx1NP_001012251.1 Homeobox 140..192 CDD:278475 32/51 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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