DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and Ptx1

DIOPT Version :10

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster


Alignment Length:98 Identity:31/98 - (31%)
Similarity:44/98 - (44%) Gaps:16/98 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 GHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTR 324
            ||....|...:.|.:..                |.:.::|.|..:|..|..|||..|..|||...
  Fly   243 GHDEPMTTSGEEPKNDK----------------KNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 291

  Fly   325 RRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 357
            ..|.|||....|||.::::||:|||.||:|..:
  Fly   292 STREEIAMWTNLTEARVRVWFKNRRAKWRKRER 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 7/45 (16%)
Homeodomain 298..354 CDD:459649 25/55 (45%)
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 25/55 (45%)

Return to query results.
Submit another query.