DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and Dfd

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster


Alignment Length:494 Identity:118/494 - (23%)
Similarity:141/494 - (28%) Gaps:260/494 - (52%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 HYSQNANHQGNMPYPRFPPY-DRMPYYNGQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQLG 107
            |:.|:....||...|:|||. |...:|||.          ||...|.....|.|      .|..|
  Fly    13 HHVQSPMSMGNGLDPKFPPLADDYHHYNGH----------YSMTASTGHMSGAV------GGGAG 61

  Fly   108 VPQQQQQQQQQPSQNQQQQQAQQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLG 172
            |                                                         .:|||.|
  Fly    62 V---------------------------------------------------------GSVGGGG 69

  Fly   173 MVPEGGSP------PLVDQMSGHHMNAQM-------TLPHH------MGHPQAQLG-----YTDV 213
            .....|.|      .:|.....||.|...       :||||      .||.||..|     |.:.
  Fly    70 AGGMTGHPHSMHPADMVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGYSSNYANA 134

  Fly   214 GVPDVTEVHQN---HHNMGMYQQQSGVPPVGAP---PQGMMH----QGQGP----PQMHQG---- 260
            ..|.....|.:   |.::|.|...       ||   ..|.:|    .|.||    |....|    
  Fly   135 TPPSHPHSHPHAHPHQSLGYYVHH-------APEFISAGAVHSDPTNGYGPAANVPNTSNGGGGG 192

  Fly   261 ------------------------------------HPGQHTPPSQ------------NPNSQSS 277
                                                |...|:|.||            .|.:.:.
  Fly   193 GSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTAL 257

  Fly   278 GMP-------------------------------------------------SP----------- 282
            |:.                                                 ||           
  Fly   258 GLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDD 322

  Fly   283 --------------------LYPWMR---------SQFGKCQERKRGRQTYTRYQTLELEKEFHF 318
                                :||||:         ..:....|.||.|..|||:|.||||||||:
  Fly   323 LGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHY 387

  Fly   319 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 357
            ||||||||||||||.|.|:|||||||||||||||||:||
  Fly   388 NRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNK 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 52/323 (16%)
Homeobox 301..354 CDD:395001 44/52 (85%)
DfdNP_477201.1 Homeobox 370..422 CDD:278475 43/51 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E2759_KOG0489
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.810

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