DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Antp and lab

DIOPT Version :9

Sequence 1:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster


Alignment Length:605 Identity:143/605 - (23%)
Similarity:167/605 - (27%) Gaps:312/605 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NSYMGADMHHGH-----YPGNGVTDLDAQQMHHYSQNANHQGNMPYPRFPPYDRMPYYNGQGMDQ 76
            :|..|...||.|     |.|...|...|.....|              |.|....|:..   :.|
  Fly     5 SSMYGNHPHHHHPHANAYDGYSTTTASAANASSY--------------FAPQQHQPHLQ---LQQ 52

  Fly    77 QQQHQVYSRPDS-------PSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQQAPQQ 134
            |||||...:|..       .||..|...||.|  .||..|.....|..|  |:||||||||    
  Fly    53 QQQHQHLQQPQQHLTYNGYESSSPGNYYPQQQ--AQLTPPPTSSHQVVQ--QHQQQQQAQQ---- 109

  Fly   135 LQQQLPQ------------VTQQVT--------HP------------------------------ 149
             ||..|.            :|...|        ||                              
  Fly   110 -QQLYPHSHLFSPSAAEYGITTSTTTGNPGTPLHPSSHSPADSYYESDSVHSYYATAAVATVAPP 173

  Fly   150 -----------------QQQQQQPVV---------------YASCKLQAAVGGL----------- 171
                             ||||||..:               |.:.:.||.|.|.           
  Fly   174 SNSSPITAANASATSNTQQQQQQAAIISSENGMMYTNLDCMYPTAQAQAPVHGYAGQIEEKYAAV 238

  Fly   172 -------GMVPEGGSPPL--------------------VDQMSGHHMNAQM--TLPH-HMG---- 202
                   |||.|...|.:                    :|.|....|:|.|  .||| |:|    
  Fly   239 LHASYAPGMVLEDQDPMMQQATQSQMWHHQQHLAGSYALDAMDSLGMHAHMHHGLPHGHLGNLAN 303

  Fly   203 ---------------------HPQAQLGYTDVGVPDVTEVHQNHH------NMGMYQQQSGVPPV 240
                                 |||.|          ....||.||      |.||.:||.|    
  Fly   304 NPHQQQPQVQQQQQQPHQQPQHPQNQ----------SPAAHQQHHQNSVSPNGGMNRQQRG---- 354

  Fly   241 GAPPQGMMHQGQGPPQMHQGHPGQH--TPPSQNPNSQSSGMPSPLYPWMR--------------- 288
                 |::..|...........|.|  :..|::||..||   .|.|.||:               
  Fly   355 -----GVISPGSSTSSSTSASNGAHPASTQSKSPNHSSS---IPTYKWMQLKRNVPKPQAPKLPA 411

  Fly   289 ------------SQFGKCQ---------------------------------------------- 295
                        .|...|:                                              
  Fly   412 SGIASMHDYQMNGQLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSA 476

  Fly   296 -----------------------ERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLT 337
                                   ....||..:|..|..||||||||||||||.||||||:.|.|.
  Fly   477 HPNGMGVGLGSGSGLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLN 541

  Fly   338 ERQIKIWFQNRRMKWKKENK 357
            |.|:||||||||||.||..|
  Fly   542 ETQVKIWFQNRRMKQKKRVK 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 50/314 (16%)
Homeobox 301..354 CDD:395001 37/52 (71%)
labNP_476613.1 Homeobox 505..557 CDD:278475 37/51 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E2759_KOG0489
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
43.810

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